Gene : Glyma.01G144800 G. max Wm82.a2.v1
Defline:  (1 of 7) KOG0884 - Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase Genomic Order:  1448
Name:  ? Glyma.01G144800 Secondary Identifier:  ? PAC:30542736
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G144800 0.5kb upstream 0.5kb upstream 9795 true Chr01: 47935477-47945271 Glycine max
Glyma.01G144800 0.5kb upstream 0.5kb upstream 500 false Chr01: 47944772-47945271 Glycine max
Glyma.01G144800 0.5kb downstream 0.5kb downstream 9795 true Chr01: 47934977-47944771 Glycine max
Glyma.01G144800 0.5kb downstream 0.5kb downstream 500 false Chr01: 47934977-47935476 Glycine max
Glyma.01G144800 1.0kb upstream 1.0kb upstream 10295 true Chr01: 47935477-47945771 Glycine max
Glyma.01G144800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47944772-47945771 Glycine max
Glyma.01G144800 1.0kb downstream 1.0kb downstream 10295 true Chr01: 47934477-47944771 Glycine max
Glyma.01G144800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47934477-47935476 Glycine max
Glyma.01G144800 2.0kb upstream 2.0kb upstream 11295 true Chr01: 47935477-47946771 Glycine max
Glyma.01G144800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47944772-47946771 Glycine max
Glyma.01G144800 2.0kb downstream 2.0kb downstream 11295 true Chr01: 47933477-47944771 Glycine max
Glyma.01G144800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47933477-47935476 Glycine max
Glyma.01G144800 5.0kb upstream 5.0kb upstream 14295 true Chr01: 47935477-47949771 Glycine max
Glyma.01G144800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47944772-47949771 Glycine max
Glyma.01G144800 5.0kb downstream 5.0kb downstream 14295 true Chr01: 47930477-47944771 Glycine max
Glyma.01G144800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47930477-47935476 Glycine max
Glyma.01G144800 10.0kb upstream 10.0kb upstream 19295 true Chr01: 47935477-47954771 Glycine max
Glyma.01G144800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47944772-47954771 Glycine max
Glyma.01G144800 10.0kb downstream 10.0kb downstream 19295 true Chr01: 47925477-47944771 Glycine max
Glyma.01G144800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47925477-47935476 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305796 5265 Fabidae View MSA
124060680 5270 Rosid View MSA
123741469 5271 Pentapetalae View MSA
122790056 5272 Eudicot View MSA
122045315 5273 Angiosperm View MSA
121347403 5274 Embryophyte View MSA
123424024 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0057 0.0 55.8821    
cufflinks 11.6639 0.0 46.7766   Low
cufflinks 13.5101 0.0 50.4839    
cufflinks 13.2481 0.0 50.9767    
cufflinks 13.225 0.0 51.7745    
cufflinks 19.789 0.0 70.4581   High
cufflinks 12.5974 0.0 49.9068    
cufflinks 16.9435 0.0 62.7791   High
cufflinks 14.1557 0.0 54.0198    
cufflinks 0.566        
cufflinks 0.672        
cufflinks 0.65        
cufflinks 0.783       High
cufflinks 0.653        
cufflinks 0.575        
cufflinks 0.44       Low
cufflinks 0.63        
cufflinks 0.642        
cufflinks 0.504        
cufflinks 0.489       Low
cufflinks 0.715       High
cufflinks 0.48       Low
cufflinks 0.602        
cufflinks 0.76       High
cufflinks 0.473       Low
cufflinks 0.505        

0 Strain