Gene : Glyma.18G225800 G. max Wm82.a2.v1
Defline:  (1 of 30) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) Genomic Order:  2258
Name:  ? Glyma.18G225800 Secondary Identifier:  ? PAC:30558151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G225800 0.5kb upstream 0.5kb upstream 7209 true Chr18: 51391926-51399134 Glycine max
Glyma.18G225800 0.5kb upstream 0.5kb upstream 500 false Chr18: 51398635-51399134 Glycine max
Glyma.18G225800 0.5kb downstream 0.5kb downstream 7209 true Chr18: 51391426-51398634 Glycine max
Glyma.18G225800 0.5kb downstream 0.5kb downstream 500 false Chr18: 51391426-51391925 Glycine max
Glyma.18G225800 1.0kb upstream 1.0kb upstream 7709 true Chr18: 51391926-51399634 Glycine max
Glyma.18G225800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 51398635-51399634 Glycine max
Glyma.18G225800 1.0kb downstream 1.0kb downstream 7709 true Chr18: 51390926-51398634 Glycine max
Glyma.18G225800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 51390926-51391925 Glycine max
Glyma.18G225800 2.0kb upstream 2.0kb upstream 8709 true Chr18: 51391926-51400634 Glycine max
Glyma.18G225800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 51398635-51400634 Glycine max
Glyma.18G225800 2.0kb downstream 2.0kb downstream 8709 true Chr18: 51389926-51398634 Glycine max
Glyma.18G225800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 51389926-51391925 Glycine max
Glyma.18G225800 5.0kb upstream 5.0kb upstream 11709 true Chr18: 51391926-51403634 Glycine max
Glyma.18G225800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 51398635-51403634 Glycine max
Glyma.18G225800 5.0kb downstream 5.0kb downstream 11709 true Chr18: 51386926-51398634 Glycine max
Glyma.18G225800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 51386926-51391925 Glycine max
Glyma.18G225800 10.0kb upstream 10.0kb upstream 16709 true Chr18: 51391926-51408634 Glycine max
Glyma.18G225800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 51398635-51408634 Glycine max
Glyma.18G225800 10.0kb downstream 10.0kb downstream 16709 true Chr18: 51381926-51398634 Glycine max
Glyma.18G225800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 51381926-51391925 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312921 5265 Fabidae View MSA
124063291 5270 Rosid View MSA
123740352 5271 Pentapetalae View MSA
122790073 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.17935 0.0 30.7894    
cufflinks 9.91238 0.0 33.6767    
cufflinks 96.8154 0.0 680.531 High High
cufflinks 8.62418 0.0 32.5268    
cufflinks 1.31463 0.0 4.30652    
cufflinks 2.20562 0.0 8.00711    
cufflinks 1.32553 0.0 5.56517    
cufflinks 3.13181 0.0 13.2923    
cufflinks 0.444021 0.0 1.94854   Low
cufflinks 0.796        
cufflinks 0.017     Low Low
cufflinks 14.688     High High
cufflinks 0.249        
cufflinks 0.228        
cufflinks 0.002     Low Low
cufflinks 3.984        
cufflinks 0.098        
cufflinks 2.403        
cufflinks 2.479        
cufflinks 3.326        
cufflinks 0.026     Low Low
cufflinks 3.526        
cufflinks 3.522        
cufflinks 0.009     Low Low
cufflinks 2.879        
cufflinks 0.059     Low  

0 Strain