Gene : Glyma.01G039500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR31558:SF3 - CW14 PROTEIN Genomic Order:  395
Name:  ? Glyma.01G039500 Secondary Identifier:  ? PAC:30542175
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G039500 0.5kb upstream 0.5kb upstream 6744 true Chr01: 4288957-4295700 Glycine max
Glyma.01G039500 0.5kb upstream 0.5kb upstream 500 false Chr01: 4288957-4289456 Glycine max
Glyma.01G039500 0.5kb downstream 0.5kb downstream 6744 true Chr01: 4289457-4296200 Glycine max
Glyma.01G039500 0.5kb downstream 0.5kb downstream 500 false Chr01: 4295701-4296200 Glycine max
Glyma.01G039500 1.0kb upstream 1.0kb upstream 7244 true Chr01: 4288457-4295700 Glycine max
Glyma.01G039500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4288457-4289456 Glycine max
Glyma.01G039500 1.0kb downstream 1.0kb downstream 7244 true Chr01: 4289457-4296700 Glycine max
Glyma.01G039500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4295701-4296700 Glycine max
Glyma.01G039500 2.0kb upstream 2.0kb upstream 8244 true Chr01: 4287457-4295700 Glycine max
Glyma.01G039500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4287457-4289456 Glycine max
Glyma.01G039500 2.0kb downstream 2.0kb downstream 8244 true Chr01: 4289457-4297700 Glycine max
Glyma.01G039500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4295701-4297700 Glycine max
Glyma.01G039500 5.0kb upstream 5.0kb upstream 11244 true Chr01: 4284457-4295700 Glycine max
Glyma.01G039500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4284457-4289456 Glycine max
Glyma.01G039500 5.0kb downstream 5.0kb downstream 11244 true Chr01: 4289457-4300700 Glycine max
Glyma.01G039500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4295701-4300700 Glycine max
Glyma.01G039500 10.0kb upstream 10.0kb upstream 16244 true Chr01: 4279457-4295700 Glycine max
Glyma.01G039500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4279457-4289456 Glycine max
Glyma.01G039500 10.0kb downstream 10.0kb downstream 16244 true Chr01: 4289457-4305700 Glycine max
Glyma.01G039500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4295701-4305700 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305252 5265 Fabidae View MSA
124062593 5270 Rosid View MSA
123751029 5271 Pentapetalae View MSA
122786126 5272 Eudicot View MSA
122041786 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.63215 0.0 12.2104    
cufflinks 5.63169 0.0 20.8448    
cufflinks 7.45886 0.0 26.3678    
cufflinks 2.25591 0.0 10.9315    
cufflinks 3.98247 0.0 16.1645    
cufflinks 11.221 0.0 39.2011   High
cufflinks 0.613652 0.0 3.7041   Low
cufflinks 7.98384 0.0 28.9523    
cufflinks 3.98348 0.0 16.1557    
cufflinks 2.288       High
cufflinks 1.64        
cufflinks 1.567        
cufflinks 1.112        
cufflinks 0.943        
cufflinks 0.791        
cufflinks 0.868        
cufflinks 2.77       High
cufflinks 1.574        
cufflinks 1.079        
cufflinks 0.642       Low
cufflinks 1.269        
cufflinks 0.513       Low
cufflinks 0.548       Low
cufflinks 1.807        
cufflinks 0.679       Low
cufflinks 1.074        

0 Strain