Gene : Glyma.18G228200 G. max Wm82.a2.v1
Defline:  (1 of 20) KOG4473 - Uncharacterized membrane protein Genomic Order:  2282
Name:  ? Glyma.18G228200 Secondary Identifier:  ? PAC:30556060
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G228200 0.5kb upstream 0.5kb upstream 3305 true Chr18: 51732503-51735807 Glycine max
Glyma.18G228200 0.5kb upstream 0.5kb upstream 500 false Chr18: 51732503-51733002 Glycine max
Glyma.18G228200 0.5kb downstream 0.5kb downstream 3305 true Chr18: 51733003-51736307 Glycine max
Glyma.18G228200 0.5kb downstream 0.5kb downstream 500 false Chr18: 51735808-51736307 Glycine max
Glyma.18G228200 1.0kb upstream 1.0kb upstream 3805 true Chr18: 51732003-51735807 Glycine max
Glyma.18G228200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 51732003-51733002 Glycine max
Glyma.18G228200 1.0kb downstream 1.0kb downstream 3805 true Chr18: 51733003-51736807 Glycine max
Glyma.18G228200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 51735808-51736807 Glycine max
Glyma.18G228200 2.0kb upstream 2.0kb upstream 4805 true Chr18: 51731003-51735807 Glycine max
Glyma.18G228200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 51731003-51733002 Glycine max
Glyma.18G228200 2.0kb downstream 2.0kb downstream 4805 true Chr18: 51733003-51737807 Glycine max
Glyma.18G228200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 51735808-51737807 Glycine max
Glyma.18G228200 5.0kb upstream 5.0kb upstream 7805 true Chr18: 51728003-51735807 Glycine max
Glyma.18G228200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 51728003-51733002 Glycine max
Glyma.18G228200 5.0kb downstream 5.0kb downstream 7805 true Chr18: 51733003-51740807 Glycine max
Glyma.18G228200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 51735808-51740807 Glycine max
Glyma.18G228200 10.0kb upstream 10.0kb upstream 12805 true Chr18: 51723003-51735807 Glycine max
Glyma.18G228200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 51723003-51733002 Glycine max
Glyma.18G228200 10.0kb downstream 10.0kb downstream 12805 true Chr18: 51733003-51745807 Glycine max
Glyma.18G228200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 51735808-51745807 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791847 5273 Angiosperm View MSA
122302729 5265 Fabidae View MSA
124070582 5270 Rosid View MSA
123742461 5271 Pentapetalae View MSA
122794648 5272 Eudicot View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.630365 0.0 3.12732    
cufflinks 0.126817 0.0 0.507912 Low  
cufflinks 0.906276 0.0 4.27439    
cufflinks 0.140463 0.0 0.560453 Low  
cufflinks 0.122661 0.0 0.49538 Low  
cufflinks 16.0277 0.0 57.8913   High
cufflinks 1.10206 0.0 6.99712    
cufflinks 0.656181 0.0 4.45639    
cufflinks 0.029     Low  
cufflinks 0.003     Low Low
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.036     Low  
cufflinks 0.007     Low  
cufflinks 0.026     Low  
cufflinks 0.078     Low High
cufflinks 0.097     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.006     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain