Gene : Glyma.01G038400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31355:SF3 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  384
Name:  ? Glyma.01G038400 Secondary Identifier:  ? PAC:30541816
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G038400 0.5kb upstream 0.5kb upstream 5033 true Chr01: 4091564-4096596 Glycine max
Glyma.01G038400 0.5kb upstream 0.5kb upstream 500 false Chr01: 4091564-4092063 Glycine max
Glyma.01G038400 0.5kb downstream 0.5kb downstream 5033 true Chr01: 4092064-4097096 Glycine max
Glyma.01G038400 0.5kb downstream 0.5kb downstream 500 false Chr01: 4096597-4097096 Glycine max
Glyma.01G038400 1.0kb upstream 1.0kb upstream 5533 true Chr01: 4091064-4096596 Glycine max
Glyma.01G038400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4091064-4092063 Glycine max
Glyma.01G038400 1.0kb downstream 1.0kb downstream 5533 true Chr01: 4092064-4097596 Glycine max
Glyma.01G038400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4096597-4097596 Glycine max
Glyma.01G038400 2.0kb upstream 2.0kb upstream 6533 true Chr01: 4090064-4096596 Glycine max
Glyma.01G038400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4090064-4092063 Glycine max
Glyma.01G038400 2.0kb downstream 2.0kb downstream 6533 true Chr01: 4092064-4098596 Glycine max
Glyma.01G038400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4096597-4098596 Glycine max
Glyma.01G038400 5.0kb upstream 5.0kb upstream 9533 true Chr01: 4087064-4096596 Glycine max
Glyma.01G038400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4087064-4092063 Glycine max
Glyma.01G038400 5.0kb downstream 5.0kb downstream 9533 true Chr01: 4092064-4101596 Glycine max
Glyma.01G038400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4096597-4101596 Glycine max
Glyma.01G038400 10.0kb upstream 10.0kb upstream 14533 true Chr01: 4082064-4096596 Glycine max
Glyma.01G038400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4082064-4092063 Glycine max
Glyma.01G038400 10.0kb downstream 10.0kb downstream 14533 true Chr01: 4092064-4106596 Glycine max
Glyma.01G038400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4096597-4106596 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041018 5273 Angiosperm View MSA
122304430 5265 Fabidae View MSA
124065090 5270 Rosid View MSA
123745990 5271 Pentapetalae View MSA
122793911 5272 Eudicot View MSA
121309785 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.696601 0.0 2.45029   Low
cufflinks 5.1729 0.0 14.3037    
cufflinks 1.24056 0.0 4.1308    
cufflinks 5.56383 0.0 15.2801    
cufflinks 4.07682 0.0 11.4558    
cufflinks 1.41036 0.0 4.58257    
cufflinks 8.92037 0.0 23.8808   High
cufflinks 2.1718 0.0 6.66982    
cufflinks 2.73693 0.0 8.10867    
cufflinks 0.656        
cufflinks 0.089       Low
cufflinks 2.18        
cufflinks 2.559        
cufflinks 3.279       High
cufflinks 0.257        
cufflinks 1.83        
cufflinks 0.182       Low
cufflinks 5.466       High
cufflinks 2.917        
cufflinks 1.036        
cufflinks 0.162       Low
cufflinks 1.343        
cufflinks 1.356        
cufflinks 0.118       Low
cufflinks 1.746        
cufflinks 0.307        

0 Strain