Gene : Glyma.01G052500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31741:SF3 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  525
Name:  ? Glyma.01G052500 Secondary Identifier:  ? PAC:30542441
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G052500 0.5kb upstream 0.5kb upstream 7162 true Chr01: 6371600-6378761 Glycine max
Glyma.01G052500 0.5kb upstream 0.5kb upstream 500 false Chr01: 6378262-6378761 Glycine max
Glyma.01G052500 0.5kb downstream 0.5kb downstream 7162 true Chr01: 6371100-6378261 Glycine max
Glyma.01G052500 0.5kb downstream 0.5kb downstream 500 false Chr01: 6371100-6371599 Glycine max
Glyma.01G052500 1.0kb upstream 1.0kb upstream 7662 true Chr01: 6371600-6379261 Glycine max
Glyma.01G052500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6378262-6379261 Glycine max
Glyma.01G052500 1.0kb downstream 1.0kb downstream 7662 true Chr01: 6370600-6378261 Glycine max
Glyma.01G052500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6370600-6371599 Glycine max
Glyma.01G052500 2.0kb upstream 2.0kb upstream 8662 true Chr01: 6371600-6380261 Glycine max
Glyma.01G052500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6378262-6380261 Glycine max
Glyma.01G052500 2.0kb downstream 2.0kb downstream 8662 true Chr01: 6369600-6378261 Glycine max
Glyma.01G052500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6369600-6371599 Glycine max
Glyma.01G052500 5.0kb upstream 5.0kb upstream 11662 true Chr01: 6371600-6383261 Glycine max
Glyma.01G052500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6378262-6383261 Glycine max
Glyma.01G052500 5.0kb downstream 5.0kb downstream 11662 true Chr01: 6366600-6378261 Glycine max
Glyma.01G052500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6366600-6371599 Glycine max
Glyma.01G052500 10.0kb upstream 10.0kb upstream 16662 true Chr01: 6371600-6388261 Glycine max
Glyma.01G052500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6378262-6388261 Glycine max
Glyma.01G052500 10.0kb downstream 10.0kb downstream 16662 true Chr01: 6361600-6378261 Glycine max
Glyma.01G052500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6361600-6371599 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310707 5265 Fabidae View MSA
124072479 5270 Rosid View MSA
123747295 5271 Pentapetalae View MSA
122788549 5272 Eudicot View MSA
122046099 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.84649 0.0 5.66602   Low
cufflinks 2.12521 0.0 11.1469    
cufflinks 0.780437 0.0 5.20009   Low
cufflinks 2.6993 0.0 16.6148    
cufflinks 2.96851 0.0 15.5179    
cufflinks 2.72797 0.0 12.4903    
cufflinks 2.21116 0.0 10.403    
cufflinks 2.37925 0.0 9.72178    
cufflinks 2.01674 0.0 10.2092    
cufflinks 0.262        
cufflinks 0.082        
cufflinks 0.139        
cufflinks 0.306        
cufflinks 0.457       High
cufflinks 0.059       Low
cufflinks 0.21        
cufflinks 0.05     Low Low
cufflinks 0.287        
cufflinks 0.226        
cufflinks 0.237        
cufflinks 0.069       Low
cufflinks 0.207        
cufflinks 0.278        
cufflinks 0.102        
cufflinks 0.21        
cufflinks 0.056     Low Low

0 Strain