Gene : Glyma.01G052100 G. max Wm82.a2.v1
Defline:  (1 of 17) PF13359 - DDE superfamily endonuclease (DDE_Tnp_4) Genomic Order:  521
Name:  ? Glyma.01G052100 Secondary Identifier:  ? PAC:30543229
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G052100 0.5kb upstream 0.5kb upstream 1663 true Chr01: 6318918-6320580 Glycine max
Glyma.01G052100 0.5kb upstream 0.5kb upstream 500 false Chr01: 6318918-6319417 Glycine max
Glyma.01G052100 0.5kb downstream 0.5kb downstream 1663 true Chr01: 6319418-6321080 Glycine max
Glyma.01G052100 0.5kb downstream 0.5kb downstream 500 false Chr01: 6320581-6321080 Glycine max
Glyma.01G052100 1.0kb upstream 1.0kb upstream 2163 true Chr01: 6318418-6320580 Glycine max
Glyma.01G052100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6318418-6319417 Glycine max
Glyma.01G052100 1.0kb downstream 1.0kb downstream 2163 true Chr01: 6319418-6321580 Glycine max
Glyma.01G052100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6320581-6321580 Glycine max
Glyma.01G052100 2.0kb upstream 2.0kb upstream 3163 true Chr01: 6317418-6320580 Glycine max
Glyma.01G052100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6317418-6319417 Glycine max
Glyma.01G052100 2.0kb downstream 2.0kb downstream 3163 true Chr01: 6319418-6322580 Glycine max
Glyma.01G052100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6320581-6322580 Glycine max
Glyma.01G052100 5.0kb upstream 5.0kb upstream 6163 true Chr01: 6314418-6320580 Glycine max
Glyma.01G052100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6314418-6319417 Glycine max
Glyma.01G052100 5.0kb downstream 5.0kb downstream 6163 true Chr01: 6319418-6325580 Glycine max
Glyma.01G052100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6320581-6325580 Glycine max
Glyma.01G052100 10.0kb upstream 10.0kb upstream 11163 true Chr01: 6309418-6320580 Glycine max
Glyma.01G052100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6309418-6319417 Glycine max
Glyma.01G052100 10.0kb downstream 10.0kb downstream 11163 true Chr01: 6319418-6330580 Glycine max
Glyma.01G052100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6320581-6330580 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315117 5265 Fabidae View MSA
124066103 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain