Gene : Glyma.01G146500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED Genomic Order:  1465
Name:  ? Glyma.01G146500 Secondary Identifier:  ? PAC:30541745
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G146500 0.5kb upstream 0.5kb upstream 2350 true Chr01: 48175546-48177895 Glycine max
Glyma.01G146500 0.5kb upstream 0.5kb upstream 500 false Chr01: 48175546-48176045 Glycine max
Glyma.01G146500 0.5kb downstream 0.5kb downstream 2350 true Chr01: 48176046-48178395 Glycine max
Glyma.01G146500 0.5kb downstream 0.5kb downstream 500 false Chr01: 48177896-48178395 Glycine max
Glyma.01G146500 1.0kb upstream 1.0kb upstream 2850 true Chr01: 48175046-48177895 Glycine max
Glyma.01G146500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48175046-48176045 Glycine max
Glyma.01G146500 1.0kb downstream 1.0kb downstream 2850 true Chr01: 48176046-48178895 Glycine max
Glyma.01G146500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48177896-48178895 Glycine max
Glyma.01G146500 2.0kb upstream 2.0kb upstream 3850 true Chr01: 48174046-48177895 Glycine max
Glyma.01G146500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48174046-48176045 Glycine max
Glyma.01G146500 2.0kb downstream 2.0kb downstream 3850 true Chr01: 48176046-48179895 Glycine max
Glyma.01G146500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48177896-48179895 Glycine max
Glyma.01G146500 5.0kb upstream 5.0kb upstream 6850 true Chr01: 48171046-48177895 Glycine max
Glyma.01G146500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48171046-48176045 Glycine max
Glyma.01G146500 5.0kb downstream 5.0kb downstream 6850 true Chr01: 48176046-48182895 Glycine max
Glyma.01G146500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48177896-48182895 Glycine max
Glyma.01G146500 10.0kb upstream 10.0kb upstream 11850 true Chr01: 48166046-48177895 Glycine max
Glyma.01G146500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48166046-48176045 Glycine max
Glyma.01G146500 10.0kb downstream 10.0kb downstream 11850 true Chr01: 48176046-48187895 Glycine max
Glyma.01G146500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48177896-48187895 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311113 5265 Fabidae View MSA
124068292 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.547747 0.0 2.00384    
cufflinks 0.609962 0.0 2.21537    
cufflinks 44.9258 0.0 127.439 High High
cufflinks 0.0889599 0.0 0.352157 Low Low
cufflinks 1.79512 0.0 5.92718    
cufflinks 8.13381 0.0 22.2443    
cufflinks 0.339585 0.0 1.27422    
cufflinks 0.268664 0.0 1.0164    
cufflinks 3.1552 0.0 9.59793    
cufflinks 0.541       Low
cufflinks 17.79     High High
cufflinks 33.216     High High
cufflinks 4.097        
cufflinks 1.831        
cufflinks 1.599        
cufflinks 0.895        
cufflinks 5.59        
cufflinks 0.379       Low
cufflinks 0.997        
cufflinks 0.733        
cufflinks 8.019     High  
cufflinks 0.732        
cufflinks 0.931        
cufflinks 21.185     High High
cufflinks 0.742        
cufflinks 11.705     High High

0 Strain