Gene : Glyma.01G157900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR18966//PTHR18966:SF245 - IONOTROPIC GLUTAMATE RECEPTOR Genomic Order:  1579
Name:  ? Glyma.01G157900 Secondary Identifier:  ? PAC:30543347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G157900 0.5kb upstream 0.5kb upstream 5758 true Chr01: 49591328-49597085 Glycine max
Glyma.01G157900 0.5kb upstream 0.5kb upstream 500 false Chr01: 49596586-49597085 Glycine max
Glyma.01G157900 0.5kb downstream 0.5kb downstream 5758 true Chr01: 49590828-49596585 Glycine max
Glyma.01G157900 0.5kb downstream 0.5kb downstream 500 false Chr01: 49590828-49591327 Glycine max
Glyma.01G157900 1.0kb upstream 1.0kb upstream 6258 true Chr01: 49591328-49597585 Glycine max
Glyma.01G157900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49596586-49597585 Glycine max
Glyma.01G157900 1.0kb downstream 1.0kb downstream 6258 true Chr01: 49590328-49596585 Glycine max
Glyma.01G157900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49590328-49591327 Glycine max
Glyma.01G157900 2.0kb upstream 2.0kb upstream 7258 true Chr01: 49591328-49598585 Glycine max
Glyma.01G157900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49596586-49598585 Glycine max
Glyma.01G157900 2.0kb downstream 2.0kb downstream 7258 true Chr01: 49589328-49596585 Glycine max
Glyma.01G157900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49589328-49591327 Glycine max
Glyma.01G157900 5.0kb upstream 5.0kb upstream 10258 true Chr01: 49591328-49601585 Glycine max
Glyma.01G157900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49596586-49601585 Glycine max
Glyma.01G157900 5.0kb downstream 5.0kb downstream 10258 true Chr01: 49586328-49596585 Glycine max
Glyma.01G157900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49586328-49591327 Glycine max
Glyma.01G157900 10.0kb upstream 10.0kb upstream 15258 true Chr01: 49591328-49606585 Glycine max
Glyma.01G157900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49596586-49606585 Glycine max
Glyma.01G157900 10.0kb downstream 10.0kb downstream 15258 true Chr01: 49581328-49596585 Glycine max
Glyma.01G157900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49581328-49591327 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314221 5265 Fabidae View MSA
124074181 5270 Rosid View MSA
123745349 5271 Pentapetalae View MSA
122785834 5272 Eudicot View MSA
122045800 5273 Angiosperm View MSA
121348236 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.87 0.0 161.056 High High
cufflinks 9.46356 0.0 28.6831    
cufflinks 8.16165 0.0 24.6405    
cufflinks 13.3947 0.0 41.4483    
cufflinks 6.3232 0.0 19.5575    
cufflinks 2.084 0.0 7.98907   Low
cufflinks 3.09677 0.0 10.579   Low
cufflinks 13.373 0.0 40.9311    
cufflinks 6.08283 0.0 21.2416    
cufflinks 3.785        
cufflinks 0.928       Low
cufflinks 3.231        
cufflinks 1.349        
cufflinks 1.073       Low
cufflinks 0.952       Low
cufflinks 5.589        
cufflinks 2.918        
cufflinks 3.664        
cufflinks 4.139        
cufflinks 7.399     High High
cufflinks 1.133       Low
cufflinks 7.908     High High
cufflinks 5.589        
cufflinks 1.353        
cufflinks 7.859     High High
cufflinks 0.796       Low

0 Strain