Gene : Glyma.18G268900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31680:SF4 - PROTEIN LONGIFOLIA 1-RELATED Genomic Order:  2689
Name:  ? Glyma.18G268900 Secondary Identifier:  ? PAC:30557606
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G268900 0.5kb upstream 0.5kb upstream 6558 true Chr18: 55259873-55266430 Glycine max
Glyma.18G268900 0.5kb upstream 0.5kb upstream 500 false Chr18: 55265931-55266430 Glycine max
Glyma.18G268900 0.5kb downstream 0.5kb downstream 6558 true Chr18: 55259373-55265930 Glycine max
Glyma.18G268900 0.5kb downstream 0.5kb downstream 500 false Chr18: 55259373-55259872 Glycine max
Glyma.18G268900 1.0kb upstream 1.0kb upstream 7058 true Chr18: 55259873-55266930 Glycine max
Glyma.18G268900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55265931-55266930 Glycine max
Glyma.18G268900 1.0kb downstream 1.0kb downstream 7058 true Chr18: 55258873-55265930 Glycine max
Glyma.18G268900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55258873-55259872 Glycine max
Glyma.18G268900 2.0kb upstream 2.0kb upstream 8058 true Chr18: 55259873-55267930 Glycine max
Glyma.18G268900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55265931-55267930 Glycine max
Glyma.18G268900 2.0kb downstream 2.0kb downstream 8058 true Chr18: 55257873-55265930 Glycine max
Glyma.18G268900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55257873-55259872 Glycine max
Glyma.18G268900 5.0kb upstream 5.0kb upstream 11058 true Chr18: 55259873-55270930 Glycine max
Glyma.18G268900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55265931-55270930 Glycine max
Glyma.18G268900 5.0kb downstream 5.0kb downstream 11058 true Chr18: 55254873-55265930 Glycine max
Glyma.18G268900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55254873-55259872 Glycine max
Glyma.18G268900 10.0kb upstream 10.0kb upstream 16058 true Chr18: 55259873-55275930 Glycine max
Glyma.18G268900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55265931-55275930 Glycine max
Glyma.18G268900 10.0kb downstream 10.0kb downstream 16058 true Chr18: 55249873-55265930 Glycine max
Glyma.18G268900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55249873-55259872 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026676 5273 Angiosperm View MSA
122316112 5265 Fabidae View MSA
124071879 5270 Rosid View MSA
123746189 5271 Pentapetalae View MSA
122771811 5272 Eudicot View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.30215 0.0 1.37197   Low
cufflinks 3.16998 0.0 11.9278   High
cufflinks 1.38266 0.0 6.48436    
cufflinks 0.688452 0.0 2.58395    
cufflinks 5.49384 0.0 19.0735   High
cufflinks 1.71753 0.0 6.48887    
cufflinks 0.673342 0.0 2.56728    
cufflinks 0.363475 0.0 1.5676   Low
cufflinks 1.26267 0.0 5.23164    
cufflinks 1.62        
cufflinks 0.031     Low Low
cufflinks 0.718        
cufflinks 2.164        
cufflinks 3.261       High
cufflinks 0.002     Low Low
cufflinks 0.951        
cufflinks 0.05     Low Low
cufflinks 1.889        
cufflinks 0.896        
cufflinks 1.3        
cufflinks 0.079        
cufflinks 1.112        
cufflinks 0.968        
cufflinks 0.06        
cufflinks 1.116        
cufflinks 0.162        

0 Strain