Gene : Glyma.01G174000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23075:SF3 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  1740
Name:  ? Glyma.01G174000 Secondary Identifier:  ? PAC:30545028
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G174000 0.5kb upstream 0.5kb upstream 6395 true Chr01: 51095132-51101526 Glycine max
Glyma.01G174000 0.5kb upstream 0.5kb upstream 500 false Chr01: 51095132-51095631 Glycine max
Glyma.01G174000 0.5kb downstream 0.5kb downstream 6395 true Chr01: 51095632-51102026 Glycine max
Glyma.01G174000 0.5kb downstream 0.5kb downstream 500 false Chr01: 51101527-51102026 Glycine max
Glyma.01G174000 1.0kb upstream 1.0kb upstream 6895 true Chr01: 51094632-51101526 Glycine max
Glyma.01G174000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51094632-51095631 Glycine max
Glyma.01G174000 1.0kb downstream 1.0kb downstream 6895 true Chr01: 51095632-51102526 Glycine max
Glyma.01G174000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51101527-51102526 Glycine max
Glyma.01G174000 2.0kb upstream 2.0kb upstream 7895 true Chr01: 51093632-51101526 Glycine max
Glyma.01G174000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51093632-51095631 Glycine max
Glyma.01G174000 2.0kb downstream 2.0kb downstream 7895 true Chr01: 51095632-51103526 Glycine max
Glyma.01G174000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51101527-51103526 Glycine max
Glyma.01G174000 5.0kb upstream 5.0kb upstream 10895 true Chr01: 51090632-51101526 Glycine max
Glyma.01G174000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51090632-51095631 Glycine max
Glyma.01G174000 5.0kb downstream 5.0kb downstream 10895 true Chr01: 51095632-51106526 Glycine max
Glyma.01G174000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51101527-51106526 Glycine max
Glyma.01G174000 10.0kb upstream 10.0kb upstream 15895 true Chr01: 51085632-51101526 Glycine max
Glyma.01G174000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51085632-51095631 Glycine max
Glyma.01G174000 10.0kb downstream 10.0kb downstream 15895 true Chr01: 51095632-51111526 Glycine max
Glyma.01G174000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51101527-51111526 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308293 5265 Fabidae View MSA
124067712 5270 Rosid View MSA
123739044 5271 Pentapetalae View MSA
122789244 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.93884 0.0 37.4588   High
cufflinks 3.92087 0.0 19.4523    
cufflinks 1.73069 0.0 10.9371   Low
cufflinks 3.55214 0.0 18.6922    
cufflinks 6.27129 0.0 26.9755   High
cufflinks 2.734 0.0 11.558    
cufflinks 4.50795 0.0 20.8426    
cufflinks 4.78377 0.0 21.7699    
cufflinks 4.05461 0.0 22.4649    
cufflinks 0.483        
cufflinks 0.169       Low
cufflinks 0.482        
cufflinks 1.165       High
cufflinks 1.77       High
cufflinks 0.35        
cufflinks 0.492        
cufflinks 0.381        
cufflinks 0.433        
cufflinks 0.953       High
cufflinks 0.285        
cufflinks 0.202       Low
cufflinks 0.37        
cufflinks 0.689        
cufflinks 0.178       Low
cufflinks 0.383        
cufflinks 0.378        

0 Strain