Gene : Glyma.01G175600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  1756
Name:  ? Glyma.01G175600 Secondary Identifier:  ? PAC:30544599
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G175600 0.5kb upstream 0.5kb upstream 7228 true Chr01: 51229467-51236694 Glycine max
Glyma.01G175600 0.5kb upstream 0.5kb upstream 500 false Chr01: 51229467-51229966 Glycine max
Glyma.01G175600 0.5kb downstream 0.5kb downstream 7228 true Chr01: 51229967-51237194 Glycine max
Glyma.01G175600 0.5kb downstream 0.5kb downstream 500 false Chr01: 51236695-51237194 Glycine max
Glyma.01G175600 1.0kb upstream 1.0kb upstream 7728 true Chr01: 51228967-51236694 Glycine max
Glyma.01G175600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51228967-51229966 Glycine max
Glyma.01G175600 1.0kb downstream 1.0kb downstream 7728 true Chr01: 51229967-51237694 Glycine max
Glyma.01G175600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51236695-51237694 Glycine max
Glyma.01G175600 2.0kb upstream 2.0kb upstream 8728 true Chr01: 51227967-51236694 Glycine max
Glyma.01G175600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51227967-51229966 Glycine max
Glyma.01G175600 2.0kb downstream 2.0kb downstream 8728 true Chr01: 51229967-51238694 Glycine max
Glyma.01G175600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51236695-51238694 Glycine max
Glyma.01G175600 5.0kb upstream 5.0kb upstream 11728 true Chr01: 51224967-51236694 Glycine max
Glyma.01G175600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51224967-51229966 Glycine max
Glyma.01G175600 5.0kb downstream 5.0kb downstream 11728 true Chr01: 51229967-51241694 Glycine max
Glyma.01G175600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51236695-51241694 Glycine max
Glyma.01G175600 10.0kb upstream 10.0kb upstream 16728 true Chr01: 51219967-51236694 Glycine max
Glyma.01G175600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51219967-51229966 Glycine max
Glyma.01G175600 10.0kb downstream 10.0kb downstream 16728 true Chr01: 51229967-51246694 Glycine max
Glyma.01G175600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51236695-51246694 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310620 5265 Fabidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.889 0.0 96.0283 High Low
cufflinks 30.991 0.0 101.471 High  
cufflinks 29.0654 0.0 109.35 High  
cufflinks 39.8102 0.0 165.611 High  
cufflinks 55.5931 0.0 256.617 High High
cufflinks 48.1425 0.0 207.283 High High
cufflinks 33.6557 0.0 132.81 High  
cufflinks 40.5724 0.0 141.667 High  
cufflinks 39.3963 0.0 136.302 High  
cufflinks 6.303       High
cufflinks 2.329       Low
cufflinks 4.014        
cufflinks 7.755     High High
cufflinks 8.114     High High
cufflinks 2.509       Low
cufflinks 3.034        
cufflinks 4.027        
cufflinks 4.693        
cufflinks 4.393        
cufflinks 2.545        
cufflinks 3.152        
cufflinks 3.065        
cufflinks 3.252        
cufflinks 2.807        
cufflinks 2.776        
cufflinks 3.472        

0 Strain