Gene : Glyma.01G110500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10994:SF65 - RETICULON-LIKE PROTEIN B12 Genomic Order:  1105
Name:  ? Glyma.01G110500 Secondary Identifier:  ? PAC:30544914
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G110500 0.5kb upstream 0.5kb upstream 3692 true Chr01: 37527681-37531372 Glycine max
Glyma.01G110500 0.5kb upstream 0.5kb upstream 500 false Chr01: 37530873-37531372 Glycine max
Glyma.01G110500 0.5kb downstream 0.5kb downstream 3692 true Chr01: 37527181-37530872 Glycine max
Glyma.01G110500 0.5kb downstream 0.5kb downstream 500 false Chr01: 37527181-37527680 Glycine max
Glyma.01G110500 1.0kb upstream 1.0kb upstream 4192 true Chr01: 37527681-37531872 Glycine max
Glyma.01G110500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37530873-37531872 Glycine max
Glyma.01G110500 1.0kb downstream 1.0kb downstream 4192 true Chr01: 37526681-37530872 Glycine max
Glyma.01G110500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37526681-37527680 Glycine max
Glyma.01G110500 2.0kb upstream 2.0kb upstream 5192 true Chr01: 37527681-37532872 Glycine max
Glyma.01G110500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37530873-37532872 Glycine max
Glyma.01G110500 2.0kb downstream 2.0kb downstream 5192 true Chr01: 37525681-37530872 Glycine max
Glyma.01G110500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37525681-37527680 Glycine max
Glyma.01G110500 5.0kb upstream 5.0kb upstream 8192 true Chr01: 37527681-37535872 Glycine max
Glyma.01G110500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37530873-37535872 Glycine max
Glyma.01G110500 5.0kb downstream 5.0kb downstream 8192 true Chr01: 37522681-37530872 Glycine max
Glyma.01G110500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37522681-37527680 Glycine max
Glyma.01G110500 10.0kb upstream 10.0kb upstream 13192 true Chr01: 37527681-37540872 Glycine max
Glyma.01G110500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37530873-37540872 Glycine max
Glyma.01G110500 10.0kb downstream 10.0kb downstream 13192 true Chr01: 37517681-37530872 Glycine max
Glyma.01G110500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37517681-37527680 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300459 5265 Fabidae View MSA
124068934 5270 Rosid View MSA
123737758 5271 Pentapetalae View MSA
122789632 5272 Eudicot View MSA
122047418 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46412 0.0 6.32385   Low
cufflinks 5.7935 0.0 25.6827    
cufflinks 1.42148 0.0 8.09837   Low
cufflinks 6.88064 0.0 29.0097    
cufflinks 5.22318 0.0 15.6932    
cufflinks 17.5412 0.0 52.4941   High
cufflinks 4.68664 0.0 19.0963    
cufflinks 8.77656 0.0 34.2155    
cufflinks 4.0706 0.0 12.8532    
cufflinks 6.853       High
cufflinks 0.427        
cufflinks 0.755        
cufflinks 1.625        
cufflinks 1.754        
cufflinks 0.635        
cufflinks 0.644        
cufflinks 4.616       High
cufflinks 1.157        
cufflinks 2.059        
cufflinks 0.409        
cufflinks 0.526        
cufflinks 0.539        
cufflinks 0.66        
cufflinks 0.308       Low
cufflinks 0.455        
cufflinks 0.876        

0 Strain