Gene : Glyma.01G107400 G. max Wm82.a2.v1
Defline:  (1 of 16) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  1074
Name:  ? Glyma.01G107400 Secondary Identifier:  ? PAC:30541945
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G107400 0.5kb upstream 0.5kb upstream 1316 true Chr01: 36636204-36637519 Glycine max
Glyma.01G107400 0.5kb upstream 0.5kb upstream 500 false Chr01: 36637020-36637519 Glycine max
Glyma.01G107400 0.5kb downstream 0.5kb downstream 1316 true Chr01: 36635704-36637019 Glycine max
Glyma.01G107400 0.5kb downstream 0.5kb downstream 500 false Chr01: 36635704-36636203 Glycine max
Glyma.01G107400 1.0kb upstream 1.0kb upstream 1816 true Chr01: 36636204-36638019 Glycine max
Glyma.01G107400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36637020-36638019 Glycine max
Glyma.01G107400 1.0kb downstream 1.0kb downstream 1816 true Chr01: 36635204-36637019 Glycine max
Glyma.01G107400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36635204-36636203 Glycine max
Glyma.01G107400 2.0kb upstream 2.0kb upstream 2816 true Chr01: 36636204-36639019 Glycine max
Glyma.01G107400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36637020-36639019 Glycine max
Glyma.01G107400 2.0kb downstream 2.0kb downstream 2816 true Chr01: 36634204-36637019 Glycine max
Glyma.01G107400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36634204-36636203 Glycine max
Glyma.01G107400 5.0kb upstream 5.0kb upstream 5816 true Chr01: 36636204-36642019 Glycine max
Glyma.01G107400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36637020-36642019 Glycine max
Glyma.01G107400 5.0kb downstream 5.0kb downstream 5816 true Chr01: 36631204-36637019 Glycine max
Glyma.01G107400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36631204-36636203 Glycine max
Glyma.01G107400 10.0kb upstream 10.0kb upstream 10816 true Chr01: 36636204-36647019 Glycine max
Glyma.01G107400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36637020-36647019 Glycine max
Glyma.01G107400 10.0kb downstream 10.0kb downstream 10816 true Chr01: 36626204-36637019 Glycine max
Glyma.01G107400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36626204-36636203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309396 5265 Fabidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain