Gene : Glyma.01G114800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34550:SF1 - 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC Genomic Order:  1148
Name:  ? Glyma.01G114800 Secondary Identifier:  ? PAC:30543653
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G114800 0.5kb upstream 0.5kb upstream 1467 true Chr01: 39686955-39688421 Glycine max
Glyma.01G114800 0.5kb upstream 0.5kb upstream 500 false Chr01: 39686955-39687454 Glycine max
Glyma.01G114800 0.5kb downstream 0.5kb downstream 1467 true Chr01: 39687455-39688921 Glycine max
Glyma.01G114800 0.5kb downstream 0.5kb downstream 500 false Chr01: 39688422-39688921 Glycine max
Glyma.01G114800 1.0kb upstream 1.0kb upstream 1967 true Chr01: 39686455-39688421 Glycine max
Glyma.01G114800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39686455-39687454 Glycine max
Glyma.01G114800 1.0kb downstream 1.0kb downstream 1967 true Chr01: 39687455-39689421 Glycine max
Glyma.01G114800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39688422-39689421 Glycine max
Glyma.01G114800 2.0kb upstream 2.0kb upstream 2967 true Chr01: 39685455-39688421 Glycine max
Glyma.01G114800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39685455-39687454 Glycine max
Glyma.01G114800 2.0kb downstream 2.0kb downstream 2967 true Chr01: 39687455-39690421 Glycine max
Glyma.01G114800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39688422-39690421 Glycine max
Glyma.01G114800 5.0kb upstream 5.0kb upstream 5967 true Chr01: 39682455-39688421 Glycine max
Glyma.01G114800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39682455-39687454 Glycine max
Glyma.01G114800 5.0kb downstream 5.0kb downstream 5967 true Chr01: 39687455-39693421 Glycine max
Glyma.01G114800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39688422-39693421 Glycine max
Glyma.01G114800 10.0kb upstream 10.0kb upstream 10967 true Chr01: 39677455-39688421 Glycine max
Glyma.01G114800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39677455-39687454 Glycine max
Glyma.01G114800 10.0kb downstream 10.0kb downstream 10967 true Chr01: 39687455-39698421 Glycine max
Glyma.01G114800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39688422-39698421 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307820 5265 Fabidae View MSA
124067793 5270 Rosid View MSA
123752888 5271 Pentapetalae View MSA
122792825 5272 Eudicot View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.3953 0.0 97.9147 High  
cufflinks 51.7419 0.0 138.061 High High
cufflinks 15.9029 0.0 46.0201    
cufflinks 26.2315 0.0 71.861 High  
cufflinks 13.6066 0.0 39.8714    
cufflinks 5.94755 0.0 19.629   Low
cufflinks 26.4016 0.0 72.2023 High  
cufflinks 20.6307 0.0 57.5922    
cufflinks 14.7612 0.0 42.8661    
cufflinks 12.065     High  
cufflinks 1.385       Low
cufflinks 15.869     High  
cufflinks 2.588        
cufflinks 2.165        
cufflinks 6.918     High  
cufflinks 84.366     High High
cufflinks 2.392        
cufflinks 15.662     High  
cufflinks 23.185     High  
cufflinks 102.889     High High
cufflinks 1.304       Low
cufflinks 83.588     High High
cufflinks 63.668     High High
cufflinks 1.225       Low
cufflinks 86.276     High High
cufflinks 1.643       Low

0 Strain