Gene : Glyma.01G118000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR18968:SF137 - PYRUVATE DECARBOXYLASE 2 Genomic Order:  1180
Name:  ? Glyma.01G118000 Secondary Identifier:  ? PAC:30543980
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5486 Glycine max pathologic  
Gmax PWY-6330 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G118000 0.5kb upstream 0.5kb upstream 4038 true Chr01: 40666204-40670241 Glycine max
Glyma.01G118000 0.5kb upstream 0.5kb upstream 500 false Chr01: 40669742-40670241 Glycine max
Glyma.01G118000 0.5kb downstream 0.5kb downstream 4038 true Chr01: 40665704-40669741 Glycine max
Glyma.01G118000 0.5kb downstream 0.5kb downstream 500 false Chr01: 40665704-40666203 Glycine max
Glyma.01G118000 1.0kb upstream 1.0kb upstream 4538 true Chr01: 40666204-40670741 Glycine max
Glyma.01G118000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40669742-40670741 Glycine max
Glyma.01G118000 1.0kb downstream 1.0kb downstream 4538 true Chr01: 40665204-40669741 Glycine max
Glyma.01G118000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40665204-40666203 Glycine max
Glyma.01G118000 2.0kb upstream 2.0kb upstream 5538 true Chr01: 40666204-40671741 Glycine max
Glyma.01G118000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40669742-40671741 Glycine max
Glyma.01G118000 2.0kb downstream 2.0kb downstream 5538 true Chr01: 40664204-40669741 Glycine max
Glyma.01G118000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40664204-40666203 Glycine max
Glyma.01G118000 5.0kb upstream 5.0kb upstream 8538 true Chr01: 40666204-40674741 Glycine max
Glyma.01G118000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40669742-40674741 Glycine max
Glyma.01G118000 5.0kb downstream 5.0kb downstream 8538 true Chr01: 40661204-40669741 Glycine max
Glyma.01G118000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40661204-40666203 Glycine max
Glyma.01G118000 10.0kb upstream 10.0kb upstream 13538 true Chr01: 40666204-40679741 Glycine max
Glyma.01G118000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40669742-40679741 Glycine max
Glyma.01G118000 10.0kb downstream 10.0kb downstream 13538 true Chr01: 40656204-40669741 Glycine max
Glyma.01G118000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40656204-40666203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310643 5265 Fabidae View MSA
124061112 5270 Rosid View MSA
123745857 5271 Pentapetalae View MSA
122791773 5272 Eudicot View MSA
122042059 5273 Angiosperm View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.426932 0.0 2.52809    
cufflinks 0.0345608 0.0 0.146338 Low Low
cufflinks 0.704547 0.0 4.37804    
cufflinks 1.11154 0.0 7.01248   High
cufflinks 0.374961 0.0 2.24524    
cufflinks 0.649733 0.0 2.80827    
cufflinks 0.094278 0.0 0.685478 Low Low
cufflinks 0.254741 0.0 2.02851 Low  
cufflinks 0.106        
cufflinks 29.017     High High
cufflinks 0.271        
cufflinks 0.186        
cufflinks 4.591        
cufflinks 19.102     High High
cufflinks 0.003     Low Low
cufflinks 2.912        
cufflinks 1.306        
cufflinks 0.113        
cufflinks 0.006     Low Low
cufflinks 49.05     High High
cufflinks 0.003     Low Low
cufflinks 0.009     Low Low
cufflinks 11.362     High  
cufflinks 0.008     Low Low
cufflinks 19.904     High High

0 Strain