Gene : Glyma.01G116300 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR11695:SF395 - ALCOHOL DEHYDROGENASE-LIKE 3-RELATED Genomic Order:  1163
Name:  ? Glyma.01G116300 Secondary Identifier:  ? PAC:30542471
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5486 Glycine max pathologic  
Gmax PWY-6333 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  
Gmax PWY-6802 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G116300 0.5kb upstream 0.5kb upstream 14537 true Chr01: 40138673-40153209 Glycine max
Glyma.01G116300 0.5kb upstream 0.5kb upstream 500 false Chr01: 40138673-40139172 Glycine max
Glyma.01G116300 0.5kb downstream 0.5kb downstream 14537 true Chr01: 40139173-40153709 Glycine max
Glyma.01G116300 0.5kb downstream 0.5kb downstream 500 false Chr01: 40153210-40153709 Glycine max
Glyma.01G116300 1.0kb upstream 1.0kb upstream 15037 true Chr01: 40138173-40153209 Glycine max
Glyma.01G116300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40138173-40139172 Glycine max
Glyma.01G116300 1.0kb downstream 1.0kb downstream 15037 true Chr01: 40139173-40154209 Glycine max
Glyma.01G116300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40153210-40154209 Glycine max
Glyma.01G116300 2.0kb upstream 2.0kb upstream 16037 true Chr01: 40137173-40153209 Glycine max
Glyma.01G116300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40137173-40139172 Glycine max
Glyma.01G116300 2.0kb downstream 2.0kb downstream 16037 true Chr01: 40139173-40155209 Glycine max
Glyma.01G116300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40153210-40155209 Glycine max
Glyma.01G116300 5.0kb upstream 5.0kb upstream 19037 true Chr01: 40134173-40153209 Glycine max
Glyma.01G116300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40134173-40139172 Glycine max
Glyma.01G116300 5.0kb downstream 5.0kb downstream 19037 true Chr01: 40139173-40158209 Glycine max
Glyma.01G116300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40153210-40158209 Glycine max
Glyma.01G116300 10.0kb upstream 10.0kb upstream 24037 true Chr01: 40129173-40153209 Glycine max
Glyma.01G116300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40129173-40139172 Glycine max
Glyma.01G116300 10.0kb downstream 10.0kb downstream 24037 true Chr01: 40139173-40163209 Glycine max
Glyma.01G116300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40153210-40163209 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300570 5265 Fabidae View MSA
124061215 5270 Rosid View MSA
123741103 5271 Pentapetalae View MSA
122790051 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.862637 0.0 3.79752    
cufflinks 0.0336056 0.0 0.154081 Low Low
cufflinks 0.170647 0.0 0.845275 Low  
cufflinks 0.210522 0.0 0.814601    
cufflinks 7.32039 0.0 23.486   High
cufflinks 5.56394 0.0 18.9524    
cufflinks 0.0301264 0.0 0.159254 Low Low
cufflinks 0.270977 0.0 1.33648    
cufflinks 15.3481 0.0 45.587   High
cufflinks 0.039     Low  
cufflinks 0.427        
cufflinks 0.07     Low  
cufflinks 1.688       High
cufflinks 1.401       High
cufflinks 0.091        
cufflinks 0.009     Low Low
cufflinks 1.99       High
cufflinks 0.39        
cufflinks 0.006     Low Low
cufflinks 0.005     Low Low
cufflinks 0.857        
cufflinks 0.009     Low Low
cufflinks 0.006     Low Low
cufflinks 1.417       High
cufflinks 0.008     Low Low
cufflinks 1.649       High

0 Strain