Gene : Glyma.18G259500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19139//PTHR19139:SF142 - AQUAPORIN TRANSPORTER Genomic Order:  2595
Name:  ? Glyma.18G259500 Secondary Identifier:  ? PAC:30558469
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G259500 0.5kb upstream 0.5kb upstream 5821 true Chr18: 54544515-54550335 Glycine max
Glyma.18G259500 0.5kb upstream 0.5kb upstream 500 false Chr18: 54549836-54550335 Glycine max
Glyma.18G259500 0.5kb downstream 0.5kb downstream 5821 true Chr18: 54544015-54549835 Glycine max
Glyma.18G259500 0.5kb downstream 0.5kb downstream 500 false Chr18: 54544015-54544514 Glycine max
Glyma.18G259500 1.0kb upstream 1.0kb upstream 6321 true Chr18: 54544515-54550835 Glycine max
Glyma.18G259500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 54549836-54550835 Glycine max
Glyma.18G259500 1.0kb downstream 1.0kb downstream 6321 true Chr18: 54543515-54549835 Glycine max
Glyma.18G259500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 54543515-54544514 Glycine max
Glyma.18G259500 2.0kb upstream 2.0kb upstream 7321 true Chr18: 54544515-54551835 Glycine max
Glyma.18G259500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 54549836-54551835 Glycine max
Glyma.18G259500 2.0kb downstream 2.0kb downstream 7321 true Chr18: 54542515-54549835 Glycine max
Glyma.18G259500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 54542515-54544514 Glycine max
Glyma.18G259500 5.0kb upstream 5.0kb upstream 10321 true Chr18: 54544515-54554835 Glycine max
Glyma.18G259500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 54549836-54554835 Glycine max
Glyma.18G259500 5.0kb downstream 5.0kb downstream 10321 true Chr18: 54539515-54549835 Glycine max
Glyma.18G259500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 54539515-54544514 Glycine max
Glyma.18G259500 10.0kb upstream 10.0kb upstream 15321 true Chr18: 54544515-54559835 Glycine max
Glyma.18G259500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 54549836-54559835 Glycine max
Glyma.18G259500 10.0kb downstream 10.0kb downstream 15321 true Chr18: 54534515-54549835 Glycine max
Glyma.18G259500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 54534515-54544514 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306747 5265 Fabidae View MSA
124070842 5270 Rosid View MSA
123748349 5271 Pentapetalae View MSA
122794244 5272 Eudicot View MSA
122048771 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8701 0.0 48.6644    
cufflinks 76.631 0.0 320.923 High High
cufflinks 32.6043 0.0 130.965 High  
cufflinks 5.39268 0.0 25.9246    
cufflinks 28.3711 0.0 113.614 High  
cufflinks 5.11734 0.0 24.6193    
cufflinks 2.89975 0.0 15.4573   Low
cufflinks 3.38292 0.0 20.4801   Low
cufflinks 19.0625 0.0 69.3638    
cufflinks 0.846        
cufflinks 0.064       Low
cufflinks 3.267        
cufflinks 0.201        
cufflinks 0.015     Low Low
cufflinks 0.06       Low
cufflinks 4.881        
cufflinks 0.89        
cufflinks 2.571        
cufflinks 8.62     High High
cufflinks 4.158        
cufflinks 0.042     Low Low
cufflinks 5.947        
cufflinks 11.099     High High
cufflinks 0.108        
cufflinks 4.646        
cufflinks 0.138        

0 Strain