Gene : Glyma.01G126000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11954:SF20 - MACROPHAGE MIGRATION INHIBITORY FACTOR FAMILY PROTEIN Genomic Order:  1260
Name:  ? Glyma.01G126000 Secondary Identifier:  ? PAC:30543940
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6498 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G126000 0.5kb upstream 0.5kb upstream 3840 true Chr01: 43477322-43481161 Glycine max
Glyma.01G126000 0.5kb upstream 0.5kb upstream 500 false Chr01: 43480662-43481161 Glycine max
Glyma.01G126000 0.5kb downstream 0.5kb downstream 3840 true Chr01: 43476822-43480661 Glycine max
Glyma.01G126000 0.5kb downstream 0.5kb downstream 500 false Chr01: 43476822-43477321 Glycine max
Glyma.01G126000 1.0kb upstream 1.0kb upstream 4340 true Chr01: 43477322-43481661 Glycine max
Glyma.01G126000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43480662-43481661 Glycine max
Glyma.01G126000 1.0kb downstream 1.0kb downstream 4340 true Chr01: 43476322-43480661 Glycine max
Glyma.01G126000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43476322-43477321 Glycine max
Glyma.01G126000 2.0kb upstream 2.0kb upstream 5340 true Chr01: 43477322-43482661 Glycine max
Glyma.01G126000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43480662-43482661 Glycine max
Glyma.01G126000 2.0kb downstream 2.0kb downstream 5340 true Chr01: 43475322-43480661 Glycine max
Glyma.01G126000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43475322-43477321 Glycine max
Glyma.01G126000 5.0kb upstream 5.0kb upstream 8340 true Chr01: 43477322-43485661 Glycine max
Glyma.01G126000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43480662-43485661 Glycine max
Glyma.01G126000 5.0kb downstream 5.0kb downstream 8340 true Chr01: 43472322-43480661 Glycine max
Glyma.01G126000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43472322-43477321 Glycine max
Glyma.01G126000 10.0kb upstream 10.0kb upstream 13340 true Chr01: 43477322-43490661 Glycine max
Glyma.01G126000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43480662-43490661 Glycine max
Glyma.01G126000 10.0kb downstream 10.0kb downstream 13340 true Chr01: 43467322-43480661 Glycine max
Glyma.01G126000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43467322-43477321 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026284 5273 Angiosperm View MSA
122305671 5265 Fabidae View MSA
124069445 5270 Rosid View MSA
123741534 5271 Pentapetalae View MSA
122794012 5272 Eudicot View MSA
121349175 5274 Embryophyte View MSA
123424544 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3454 0.0 43.9217    
cufflinks 19.154 0.0 51.2029    
cufflinks 26.5298 0.0 70.8515 High High
cufflinks 21.0751 0.0 56.2545 High  
cufflinks 12.8034 0.0 34.8222   Low
cufflinks 16.5132 0.0 44.3148    
cufflinks 13.7406 0.0 37.231    
cufflinks 25.0686 0.0 66.8957 High High
cufflinks 11.2343 0.0 30.782   Low
cufflinks 8.751     High High
cufflinks 3.266       Low
cufflinks 8.091     High High
cufflinks 3.826       Low
cufflinks 3.835       Low
cufflinks 3.118       Low
cufflinks 6.178        
cufflinks 4.792        
cufflinks 6.895        
cufflinks 7.982     High  
cufflinks 6.397        
cufflinks 4.232        
cufflinks 6.917        
cufflinks 9.401     High High
cufflinks 6.136     High  
cufflinks 6.747        
cufflinks 4.852        

0 Strain