Gene : Glyma.01G133000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23336//PTHR23336:SF24 - ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. Genomic Order:  1330
Name:  ? Glyma.01G133000 Secondary Identifier:  ? PAC:30543151
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G133000 0.5kb upstream 0.5kb upstream 8497 true Chr01: 45250013-45258509 Glycine max
Glyma.01G133000 0.5kb upstream 0.5kb upstream 500 false Chr01: 45258010-45258509 Glycine max
Glyma.01G133000 0.5kb downstream 0.5kb downstream 8497 true Chr01: 45249513-45258009 Glycine max
Glyma.01G133000 0.5kb downstream 0.5kb downstream 500 false Chr01: 45249513-45250012 Glycine max
Glyma.01G133000 1.0kb upstream 1.0kb upstream 8997 true Chr01: 45250013-45259009 Glycine max
Glyma.01G133000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45258010-45259009 Glycine max
Glyma.01G133000 1.0kb downstream 1.0kb downstream 8997 true Chr01: 45249013-45258009 Glycine max
Glyma.01G133000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45249013-45250012 Glycine max
Glyma.01G133000 2.0kb upstream 2.0kb upstream 9997 true Chr01: 45250013-45260009 Glycine max
Glyma.01G133000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45258010-45260009 Glycine max
Glyma.01G133000 2.0kb downstream 2.0kb downstream 9997 true Chr01: 45248013-45258009 Glycine max
Glyma.01G133000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45248013-45250012 Glycine max
Glyma.01G133000 5.0kb upstream 5.0kb upstream 12997 true Chr01: 45250013-45263009 Glycine max
Glyma.01G133000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45258010-45263009 Glycine max
Glyma.01G133000 5.0kb downstream 5.0kb downstream 12997 true Chr01: 45245013-45258009 Glycine max
Glyma.01G133000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45245013-45250012 Glycine max
Glyma.01G133000 10.0kb upstream 10.0kb upstream 17997 true Chr01: 45250013-45268009 Glycine max
Glyma.01G133000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45258010-45268009 Glycine max
Glyma.01G133000 10.0kb downstream 10.0kb downstream 17997 true Chr01: 45240013-45258009 Glycine max
Glyma.01G133000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45240013-45250012 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306915 5265 Fabidae View MSA
124062028 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01532 0.0 5.59531    
cufflinks 1.14676 0.0 4.98456    
cufflinks 3.36905 0.0 12.4874   High
cufflinks 0.507341 0.0 3.04178   Low
cufflinks 1.39912 0.0 5.67427    
cufflinks 2.43696 0.0 8.35173    
cufflinks 1.74367 0.0 6.73314    
cufflinks 1.90656 0.0 6.98431    
cufflinks 0.683128 0.0 3.576   Low
cufflinks 0.679        
cufflinks 0.624        
cufflinks 0.416        
cufflinks 0.594        
cufflinks 0.529        
cufflinks 0.211       Low
cufflinks 0.703        
cufflinks 0.691        
cufflinks 0.223       Low
cufflinks 0.435        
cufflinks 0.577        
cufflinks 0.686        
cufflinks 0.565        
cufflinks 0.384        
cufflinks 0.749        
cufflinks 0.659        
cufflinks 0.756        

0 Strain