Gene : Glyma.01G137500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31374:SF56 - AUXIN-REGULATED PROTEIN-RELATED Genomic Order:  1375
Name:  ? Glyma.01G137500 Secondary Identifier:  ? PAC:30542453
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G137500 0.5kb upstream 0.5kb upstream 1740 true Chr01: 46403407-46405146 Glycine max
Glyma.01G137500 0.5kb upstream 0.5kb upstream 500 false Chr01: 46403407-46403906 Glycine max
Glyma.01G137500 0.5kb downstream 0.5kb downstream 1740 true Chr01: 46403907-46405646 Glycine max
Glyma.01G137500 0.5kb downstream 0.5kb downstream 500 false Chr01: 46405147-46405646 Glycine max
Glyma.01G137500 1.0kb upstream 1.0kb upstream 2240 true Chr01: 46402907-46405146 Glycine max
Glyma.01G137500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46402907-46403906 Glycine max
Glyma.01G137500 1.0kb downstream 1.0kb downstream 2240 true Chr01: 46403907-46406146 Glycine max
Glyma.01G137500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46405147-46406146 Glycine max
Glyma.01G137500 2.0kb upstream 2.0kb upstream 3240 true Chr01: 46401907-46405146 Glycine max
Glyma.01G137500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46401907-46403906 Glycine max
Glyma.01G137500 2.0kb downstream 2.0kb downstream 3240 true Chr01: 46403907-46407146 Glycine max
Glyma.01G137500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46405147-46407146 Glycine max
Glyma.01G137500 5.0kb upstream 5.0kb upstream 6240 true Chr01: 46398907-46405146 Glycine max
Glyma.01G137500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46398907-46403906 Glycine max
Glyma.01G137500 5.0kb downstream 5.0kb downstream 6240 true Chr01: 46403907-46410146 Glycine max
Glyma.01G137500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46405147-46410146 Glycine max
Glyma.01G137500 10.0kb upstream 10.0kb upstream 11240 true Chr01: 46393907-46405146 Glycine max
Glyma.01G137500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46393907-46403906 Glycine max
Glyma.01G137500 10.0kb downstream 10.0kb downstream 11240 true Chr01: 46403907-46415146 Glycine max
Glyma.01G137500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46405147-46415146 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301915 5265 Fabidae View MSA
124066518 5270 Rosid View MSA
123741344 5271 Pentapetalae View MSA
122791593 5272 Eudicot View MSA
122049926 5273 Angiosperm View MSA
121311651 5274 Embryophyte View MSA
123348921 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.11353 0.0 7.30735    
cufflinks 1.19731 0.0 4.33473    
cufflinks 25.6617 0.0 68.5764 High High
cufflinks 0.922507 0.0 3.38806   Low
cufflinks 3.02341 0.0 9.98985    
cufflinks 4.76149 0.0 14.8083    
cufflinks 1.56353 0.0 5.53827    
cufflinks 1.76166 0.0 6.20073    
cufflinks 3.2273 0.0 10.6115    
cufflinks 5.356        
cufflinks 11.284     High  
cufflinks 21.423     High High
cufflinks 3.921        
cufflinks 2.549        
cufflinks 1.82        
cufflinks 1.673        
cufflinks 32.973     High High
cufflinks 9.266     High  
cufflinks 2.452        
cufflinks 1.036       Low
cufflinks 5.392        
cufflinks 1.72        
cufflinks 2.203        
cufflinks 14.05     High High
cufflinks 0.987       Low
cufflinks 12.024     High  

0 Strain