Gene : Glyma.18G251600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31403:SF8 - PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC Genomic Order:  2516
Name:  ? Glyma.18G251600 Secondary Identifier:  ? PAC:30554689
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  
Gmax PWY-6803 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G251600 0.5kb upstream 0.5kb upstream 1844 true Chr18: 53797282-53799125 Glycine max
Glyma.18G251600 0.5kb upstream 0.5kb upstream 500 false Chr18: 53797282-53797781 Glycine max
Glyma.18G251600 0.5kb downstream 0.5kb downstream 1844 true Chr18: 53797782-53799625 Glycine max
Glyma.18G251600 0.5kb downstream 0.5kb downstream 500 false Chr18: 53799126-53799625 Glycine max
Glyma.18G251600 1.0kb upstream 1.0kb upstream 2344 true Chr18: 53796782-53799125 Glycine max
Glyma.18G251600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53796782-53797781 Glycine max
Glyma.18G251600 1.0kb downstream 1.0kb downstream 2344 true Chr18: 53797782-53800125 Glycine max
Glyma.18G251600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53799126-53800125 Glycine max
Glyma.18G251600 2.0kb upstream 2.0kb upstream 3344 true Chr18: 53795782-53799125 Glycine max
Glyma.18G251600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53795782-53797781 Glycine max
Glyma.18G251600 2.0kb downstream 2.0kb downstream 3344 true Chr18: 53797782-53801125 Glycine max
Glyma.18G251600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53799126-53801125 Glycine max
Glyma.18G251600 5.0kb upstream 5.0kb upstream 6344 true Chr18: 53792782-53799125 Glycine max
Glyma.18G251600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53792782-53797781 Glycine max
Glyma.18G251600 5.0kb downstream 5.0kb downstream 6344 true Chr18: 53797782-53804125 Glycine max
Glyma.18G251600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53799126-53804125 Glycine max
Glyma.18G251600 10.0kb upstream 10.0kb upstream 11344 true Chr18: 53787782-53799125 Glycine max
Glyma.18G251600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53787782-53797781 Glycine max
Glyma.18G251600 10.0kb downstream 10.0kb downstream 11344 true Chr18: 53797782-53809125 Glycine max
Glyma.18G251600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53799126-53809125 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296699 5265 Fabidae View MSA
124071013 5270 Rosid View MSA
123746502 5271 Pentapetalae View MSA
122793823 5272 Eudicot View MSA
122047917 5273 Angiosperm View MSA
121310814 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0156235 0.0 0.0706574 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0103116 0.0 0.0487867 Low  
cufflinks 0.00856949 0.0 0.0412024 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.207       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain