Gene : Glyma.01G089200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10803//PTHR10803:SF2 - ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE Genomic Order:  892
Name:  ? Glyma.01G089200 Secondary Identifier:  ? PAC:30545195
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G089200 0.5kb upstream 0.5kb upstream 1858 true Chr01: 27011265-27013122 Glycine max
Glyma.01G089200 0.5kb upstream 0.5kb upstream 500 false Chr01: 27011265-27011764 Glycine max
Glyma.01G089200 0.5kb downstream 0.5kb downstream 1858 true Chr01: 27011765-27013622 Glycine max
Glyma.01G089200 0.5kb downstream 0.5kb downstream 500 false Chr01: 27013123-27013622 Glycine max
Glyma.01G089200 1.0kb upstream 1.0kb upstream 2358 true Chr01: 27010765-27013122 Glycine max
Glyma.01G089200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27010765-27011764 Glycine max
Glyma.01G089200 1.0kb downstream 1.0kb downstream 2358 true Chr01: 27011765-27014122 Glycine max
Glyma.01G089200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27013123-27014122 Glycine max
Glyma.01G089200 2.0kb upstream 2.0kb upstream 3358 true Chr01: 27009765-27013122 Glycine max
Glyma.01G089200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27009765-27011764 Glycine max
Glyma.01G089200 2.0kb downstream 2.0kb downstream 3358 true Chr01: 27011765-27015122 Glycine max
Glyma.01G089200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27013123-27015122 Glycine max
Glyma.01G089200 5.0kb upstream 5.0kb upstream 6358 true Chr01: 27006765-27013122 Glycine max
Glyma.01G089200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27006765-27011764 Glycine max
Glyma.01G089200 5.0kb downstream 5.0kb downstream 6358 true Chr01: 27011765-27018122 Glycine max
Glyma.01G089200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27013123-27018122 Glycine max
Glyma.01G089200 10.0kb upstream 10.0kb upstream 11358 true Chr01: 27001765-27013122 Glycine max
Glyma.01G089200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27001765-27011764 Glycine max
Glyma.01G089200 10.0kb downstream 10.0kb downstream 11358 true Chr01: 27011765-27023122 Glycine max
Glyma.01G089200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27013123-27023122 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244984 5265 Fabidae Singleton cluster - no MSA
124074878 5270 Rosid View MSA
123743074 5271 Pentapetalae View MSA
122792393 5272 Eudicot View MSA
122045230 5273 Angiosperm View MSA
121344575 5274 Embryophyte View MSA
123380067 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.195855 0.0 0.775864 Low  
cufflinks 0.189495 0.0 0.751455 Low  
cufflinks 0.208062 0.0 0.821212 Low  
cufflinks 0.0522676 0.0 0.221289 Low Low
cufflinks 0.2077 0.0 0.821081 Low  
cufflinks 0.0902129 0.0 0.368838 Low  
cufflinks 0.149877 0.0 0.599528 Low  
cufflinks 0.0706298 0.0 0.292495 Low Low
cufflinks 0.459199 0.0 1.75764   High
cufflinks 0.031     Low Low
cufflinks 0.21        
cufflinks 0.32        
cufflinks 0.491       High
cufflinks 0.814       High
cufflinks 0.197        
cufflinks 0.21        
cufflinks 0.044     Low Low
cufflinks 0.373        
cufflinks 0.283        
cufflinks 0.264        
cufflinks 0.188        
cufflinks 0.132        
cufflinks 0.082     Low Low
cufflinks 0.139        
cufflinks 0.41        
cufflinks 0.195        

0 Strain