Gene : Glyma.01G095600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Genomic Order:  956
Name:  ? Glyma.01G095600 Secondary Identifier:  ? PAC:30543876
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G095600 0.5kb upstream 0.5kb upstream 1547 true Chr01: 29876799-29878345 Glycine max
Glyma.01G095600 0.5kb upstream 0.5kb upstream 500 false Chr01: 29877846-29878345 Glycine max
Glyma.01G095600 0.5kb downstream 0.5kb downstream 1547 true Chr01: 29876299-29877845 Glycine max
Glyma.01G095600 0.5kb downstream 0.5kb downstream 500 false Chr01: 29876299-29876798 Glycine max
Glyma.01G095600 1.0kb upstream 1.0kb upstream 2047 true Chr01: 29876799-29878845 Glycine max
Glyma.01G095600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29877846-29878845 Glycine max
Glyma.01G095600 1.0kb downstream 1.0kb downstream 2047 true Chr01: 29875799-29877845 Glycine max
Glyma.01G095600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29875799-29876798 Glycine max
Glyma.01G095600 2.0kb upstream 2.0kb upstream 3047 true Chr01: 29876799-29879845 Glycine max
Glyma.01G095600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29877846-29879845 Glycine max
Glyma.01G095600 2.0kb downstream 2.0kb downstream 3047 true Chr01: 29874799-29877845 Glycine max
Glyma.01G095600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29874799-29876798 Glycine max
Glyma.01G095600 5.0kb upstream 5.0kb upstream 6047 true Chr01: 29876799-29882845 Glycine max
Glyma.01G095600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29877846-29882845 Glycine max
Glyma.01G095600 5.0kb downstream 5.0kb downstream 6047 true Chr01: 29871799-29877845 Glycine max
Glyma.01G095600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29871799-29876798 Glycine max
Glyma.01G095600 10.0kb upstream 10.0kb upstream 11047 true Chr01: 29876799-29887845 Glycine max
Glyma.01G095600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29877846-29887845 Glycine max
Glyma.01G095600 10.0kb downstream 10.0kb downstream 11047 true Chr01: 29866799-29877845 Glycine max
Glyma.01G095600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29866799-29876798 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297931 5265 Fabidae View MSA
124072575 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.830105 0.0 3.0712   High
cufflinks 0.0395743 0.0 0.169325 Low Low
cufflinks 0.0789796 0.0 0.322539 Low  
cufflinks 0.1034 0.0 0.416669 Low  
cufflinks 0.231241 0.0 0.905066 Low  
cufflinks 0.214833 0.0 0.842781    
cufflinks 0.302645 0.0 1.17097    
cufflinks 0.12246 0.0 0.490268 Low  
cufflinks 0.633       High
cufflinks 0.057        
cufflinks 0.138        
cufflinks 0.016     Low Low
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.454        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.319        
cufflinks 1.305       High
cufflinks 0.151        
cufflinks 0.023     Low Low
cufflinks 0.308        
cufflinks 0.312        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.23        
cufflinks 0.032     Low  

0 Strain