Gene : Glyma.01G105000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11654:SF79 - PROTEIN NRT1/ PTR FAMILY 5.5-RELATED Genomic Order:  1050
Name:  ? Glyma.01G105000 Secondary Identifier:  ? PAC:30542344
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G105000 0.5kb upstream 0.5kb upstream 7032 true Chr01: 35390519-35397550 Glycine max
Glyma.01G105000 0.5kb upstream 0.5kb upstream 500 false Chr01: 35397051-35397550 Glycine max
Glyma.01G105000 0.5kb downstream 0.5kb downstream 7032 true Chr01: 35390019-35397050 Glycine max
Glyma.01G105000 0.5kb downstream 0.5kb downstream 500 false Chr01: 35390019-35390518 Glycine max
Glyma.01G105000 1.0kb upstream 1.0kb upstream 7532 true Chr01: 35390519-35398050 Glycine max
Glyma.01G105000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35397051-35398050 Glycine max
Glyma.01G105000 1.0kb downstream 1.0kb downstream 7532 true Chr01: 35389519-35397050 Glycine max
Glyma.01G105000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35389519-35390518 Glycine max
Glyma.01G105000 2.0kb upstream 2.0kb upstream 8532 true Chr01: 35390519-35399050 Glycine max
Glyma.01G105000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35397051-35399050 Glycine max
Glyma.01G105000 2.0kb downstream 2.0kb downstream 8532 true Chr01: 35388519-35397050 Glycine max
Glyma.01G105000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35388519-35390518 Glycine max
Glyma.01G105000 5.0kb upstream 5.0kb upstream 11532 true Chr01: 35390519-35402050 Glycine max
Glyma.01G105000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35397051-35402050 Glycine max
Glyma.01G105000 5.0kb downstream 5.0kb downstream 11532 true Chr01: 35385519-35397050 Glycine max
Glyma.01G105000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35385519-35390518 Glycine max
Glyma.01G105000 10.0kb upstream 10.0kb upstream 16532 true Chr01: 35390519-35407050 Glycine max
Glyma.01G105000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35397051-35407050 Glycine max
Glyma.01G105000 10.0kb downstream 10.0kb downstream 16532 true Chr01: 35380519-35397050 Glycine max
Glyma.01G105000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35380519-35390518 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309877 5265 Fabidae View MSA
124072261 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.4188 0.0 10.2799    
cufflinks 0.364651 0.0 1.36165    
cufflinks 8.841 0.0 23.9727   High
cufflinks 0.613858 0.0 2.22753    
cufflinks 0.859373 0.0 3.05386    
cufflinks 0.061748 0.0 0.247884 Low Low
cufflinks 0.780072 0.0 2.78957    
cufflinks 2.51894 0.0 7.87667    
cufflinks 4.48218 0.0 12.9797    
cufflinks 1.632        
cufflinks 0.791        
cufflinks 2.965       High
cufflinks 0.108        
cufflinks 0.007     Low Low
cufflinks 0.937        
cufflinks 0.197        
cufflinks 5.376       High
cufflinks 1.753        
cufflinks 0.163        
cufflinks 0.047     Low Low
cufflinks 0.815        
cufflinks 0.126        
cufflinks 0.716        
cufflinks 1.027        
cufflinks 0.228        
cufflinks 2.202        

0 Strain