Gene : Glyma.01G023900 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  239
Name:  ? Glyma.01G023900 Secondary Identifier:  ? PAC:30544549
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G023900 0.5kb upstream 0.5kb upstream 9461 true Chr01: 2433777-2443237 Glycine max
Glyma.01G023900 0.5kb upstream 0.5kb upstream 500 false Chr01: 2442738-2443237 Glycine max
Glyma.01G023900 0.5kb downstream 0.5kb downstream 9461 true Chr01: 2433277-2442737 Glycine max
Glyma.01G023900 0.5kb downstream 0.5kb downstream 500 false Chr01: 2433277-2433776 Glycine max
Glyma.01G023900 1.0kb upstream 1.0kb upstream 9961 true Chr01: 2433777-2443737 Glycine max
Glyma.01G023900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2442738-2443737 Glycine max
Glyma.01G023900 1.0kb downstream 1.0kb downstream 9961 true Chr01: 2432777-2442737 Glycine max
Glyma.01G023900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2432777-2433776 Glycine max
Glyma.01G023900 2.0kb upstream 2.0kb upstream 10961 true Chr01: 2433777-2444737 Glycine max
Glyma.01G023900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2442738-2444737 Glycine max
Glyma.01G023900 2.0kb downstream 2.0kb downstream 10961 true Chr01: 2431777-2442737 Glycine max
Glyma.01G023900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2431777-2433776 Glycine max
Glyma.01G023900 5.0kb upstream 5.0kb upstream 13961 true Chr01: 2433777-2447737 Glycine max
Glyma.01G023900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2442738-2447737 Glycine max
Glyma.01G023900 5.0kb downstream 5.0kb downstream 13961 true Chr01: 2428777-2442737 Glycine max
Glyma.01G023900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2428777-2433776 Glycine max
Glyma.01G023900 10.0kb upstream 10.0kb upstream 18961 true Chr01: 2433777-2452737 Glycine max
Glyma.01G023900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2442738-2452737 Glycine max
Glyma.01G023900 10.0kb downstream 10.0kb downstream 18961 true Chr01: 2423777-2442737 Glycine max
Glyma.01G023900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2423777-2433776 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309003 5265 Fabidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.47609 0.0 14.7353   High
cufflinks 3.94883 0.0 10.8317    
cufflinks 2.76135 0.0 7.80892    
cufflinks 3.98679 0.0 10.9188    
cufflinks 3.04398 0.0 8.54049    
cufflinks 2.3122 0.0 6.68993   Low
cufflinks 6.00243 0.0 16.1062   High
cufflinks 2.95725 0.0 8.31868    
cufflinks 3.79919 0.0 10.4484    
cufflinks 1.485        
cufflinks 0.938       Low
cufflinks 1.868       High
cufflinks 1.435        
cufflinks 1.678        
cufflinks 1.37        
cufflinks 1.232        
cufflinks 0.836       Low
cufflinks 2.19       High
cufflinks 2.246       High
cufflinks 1.539        
cufflinks 1.211        
cufflinks 1.737        
cufflinks 1.194        
cufflinks 1.494        
cufflinks 1.359        
cufflinks 1.135        

0 Strain