Gene : Glyma.18G247400 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3444 - Uncharacterized conserved protein Genomic Order:  2474
Name:  ? Glyma.18G247400 Secondary Identifier:  ? PAC:30555151
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G247400 0.5kb upstream 0.5kb upstream 3345 true Chr18: 53472652-53475996 Glycine max
Glyma.18G247400 0.5kb upstream 0.5kb upstream 500 false Chr18: 53475497-53475996 Glycine max
Glyma.18G247400 0.5kb downstream 0.5kb downstream 3345 true Chr18: 53472152-53475496 Glycine max
Glyma.18G247400 0.5kb downstream 0.5kb downstream 500 false Chr18: 53472152-53472651 Glycine max
Glyma.18G247400 1.0kb upstream 1.0kb upstream 3845 true Chr18: 53472652-53476496 Glycine max
Glyma.18G247400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53475497-53476496 Glycine max
Glyma.18G247400 1.0kb downstream 1.0kb downstream 3845 true Chr18: 53471652-53475496 Glycine max
Glyma.18G247400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53471652-53472651 Glycine max
Glyma.18G247400 2.0kb upstream 2.0kb upstream 4845 true Chr18: 53472652-53477496 Glycine max
Glyma.18G247400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53475497-53477496 Glycine max
Glyma.18G247400 2.0kb downstream 2.0kb downstream 4845 true Chr18: 53470652-53475496 Glycine max
Glyma.18G247400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53470652-53472651 Glycine max
Glyma.18G247400 5.0kb upstream 5.0kb upstream 7845 true Chr18: 53472652-53480496 Glycine max
Glyma.18G247400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53475497-53480496 Glycine max
Glyma.18G247400 5.0kb downstream 5.0kb downstream 7845 true Chr18: 53467652-53475496 Glycine max
Glyma.18G247400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53467652-53472651 Glycine max
Glyma.18G247400 10.0kb upstream 10.0kb upstream 12845 true Chr18: 53472652-53485496 Glycine max
Glyma.18G247400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53475497-53485496 Glycine max
Glyma.18G247400 10.0kb downstream 10.0kb downstream 12845 true Chr18: 53462652-53475496 Glycine max
Glyma.18G247400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53462652-53472651 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309038 5265 Fabidae View MSA
124061127 5270 Rosid View MSA
123749455 5271 Pentapetalae View MSA
122790156 5272 Eudicot View MSA
122051418 5273 Angiosperm View MSA
121344842 5274 Embryophyte View MSA
123424203 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1419 0.0 36.7829    
cufflinks 21.0106 0.0 56.7671 High  
cufflinks 8.99875 0.0 26.2988   Low
cufflinks 16.3893 0.0 44.964    
cufflinks 19.488 0.0 52.831    
cufflinks 22.5875 0.0 60.8021   High
cufflinks 17.6622 0.0 48.2294    
cufflinks 18.4459 0.0 50.2328    
cufflinks 17.6983 0.0 48.2817    
cufflinks 4.943        
cufflinks 3.244        
cufflinks 3.884        
cufflinks 6.151       High
cufflinks 7.316     High High
cufflinks 2.364       Low
cufflinks 4.647        
cufflinks 2.623       Low
cufflinks 4.987        
cufflinks 5.138        
cufflinks 3.96        
cufflinks 4.051        
cufflinks 4.33        
cufflinks 4.311        
cufflinks 3.849        
cufflinks 4.369        
cufflinks 3.816        

0 Strain