Gene : Glyma.18G248100 G. max Wm82.a2.v1
Defline:  (1 of 7) KOG0884 - Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase Genomic Order:  2481
Name:  ? Glyma.18G248100 Secondary Identifier:  ? PAC:30557064
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G248100 0.5kb upstream 0.5kb upstream 5799 true Chr18: 53511479-53517277 Glycine max
Glyma.18G248100 0.5kb upstream 0.5kb upstream 500 false Chr18: 53516778-53517277 Glycine max
Glyma.18G248100 0.5kb downstream 0.5kb downstream 5799 true Chr18: 53510979-53516777 Glycine max
Glyma.18G248100 0.5kb downstream 0.5kb downstream 500 false Chr18: 53510979-53511478 Glycine max
Glyma.18G248100 1.0kb upstream 1.0kb upstream 6299 true Chr18: 53511479-53517777 Glycine max
Glyma.18G248100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53516778-53517777 Glycine max
Glyma.18G248100 1.0kb downstream 1.0kb downstream 6299 true Chr18: 53510479-53516777 Glycine max
Glyma.18G248100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53510479-53511478 Glycine max
Glyma.18G248100 2.0kb upstream 2.0kb upstream 7299 true Chr18: 53511479-53518777 Glycine max
Glyma.18G248100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53516778-53518777 Glycine max
Glyma.18G248100 2.0kb downstream 2.0kb downstream 7299 true Chr18: 53509479-53516777 Glycine max
Glyma.18G248100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53509479-53511478 Glycine max
Glyma.18G248100 5.0kb upstream 5.0kb upstream 10299 true Chr18: 53511479-53521777 Glycine max
Glyma.18G248100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53516778-53521777 Glycine max
Glyma.18G248100 5.0kb downstream 5.0kb downstream 10299 true Chr18: 53506479-53516777 Glycine max
Glyma.18G248100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53506479-53511478 Glycine max
Glyma.18G248100 10.0kb upstream 10.0kb upstream 15299 true Chr18: 53511479-53526777 Glycine max
Glyma.18G248100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53516778-53526777 Glycine max
Glyma.18G248100 10.0kb downstream 10.0kb downstream 15299 true Chr18: 53501479-53516777 Glycine max
Glyma.18G248100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53501479-53511478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308221 5265 Fabidae View MSA
124071456 5270 Rosid View MSA
123751062 5271 Pentapetalae View MSA
122773901 5272 Eudicot View MSA
122043023 5273 Angiosperm View MSA
121350933 5274 Embryophyte View MSA
123428077 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.42169 0.0 7.75094   Low
cufflinks 3.43589 0.0 10.4626    
cufflinks 5.73188 0.0 16.2837    
cufflinks 7.39497 0.0 20.5017   High
cufflinks 2.84917 0.0 8.91783   Low
cufflinks 5.40116 0.0 15.4742    
cufflinks 5.89219 0.0 16.7501    
cufflinks 6.4664 0.0 18.1934    
cufflinks 3.56797 0.0 10.8005    
cufflinks 2.534        
cufflinks 7.078     High High
cufflinks 1.468       Low
cufflinks 1.398       Low
cufflinks 1.429       Low
cufflinks 2.684        
cufflinks 4.009        
cufflinks 0.696       Low
cufflinks 2.788        
cufflinks 2.042        
cufflinks 4.234        
cufflinks 3.696        
cufflinks 3.418        
cufflinks 2.433        
cufflinks 4.576        
cufflinks 5.129       High
cufflinks 1.906        

0 Strain