Gene : Glyma.01G046000 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  460
Name:  ? Glyma.01G046000 Secondary Identifier:  ? PAC:30544552
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7601 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G046000 0.5kb upstream 0.5kb upstream 4465 true Chr01: 5316706-5321170 Glycine max
Glyma.01G046000 0.5kb upstream 0.5kb upstream 500 false Chr01: 5316706-5317205 Glycine max
Glyma.01G046000 0.5kb downstream 0.5kb downstream 4465 true Chr01: 5317206-5321670 Glycine max
Glyma.01G046000 0.5kb downstream 0.5kb downstream 500 false Chr01: 5321171-5321670 Glycine max
Glyma.01G046000 1.0kb upstream 1.0kb upstream 4965 true Chr01: 5316206-5321170 Glycine max
Glyma.01G046000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5316206-5317205 Glycine max
Glyma.01G046000 1.0kb downstream 1.0kb downstream 4965 true Chr01: 5317206-5322170 Glycine max
Glyma.01G046000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5321171-5322170 Glycine max
Glyma.01G046000 2.0kb upstream 2.0kb upstream 5965 true Chr01: 5315206-5321170 Glycine max
Glyma.01G046000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5315206-5317205 Glycine max
Glyma.01G046000 2.0kb downstream 2.0kb downstream 5965 true Chr01: 5317206-5323170 Glycine max
Glyma.01G046000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5321171-5323170 Glycine max
Glyma.01G046000 5.0kb upstream 5.0kb upstream 8965 true Chr01: 5312206-5321170 Glycine max
Glyma.01G046000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5312206-5317205 Glycine max
Glyma.01G046000 5.0kb downstream 5.0kb downstream 8965 true Chr01: 5317206-5326170 Glycine max
Glyma.01G046000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5321171-5326170 Glycine max
Glyma.01G046000 10.0kb upstream 10.0kb upstream 13965 true Chr01: 5307206-5321170 Glycine max
Glyma.01G046000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5307206-5317205 Glycine max
Glyma.01G046000 10.0kb downstream 10.0kb downstream 13965 true Chr01: 5317206-5331170 Glycine max
Glyma.01G046000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5321171-5331170 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122310948 5265 Fabidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.99334 0.0 8.85847   Low
cufflinks 7.86444 0.0 28.5813    
cufflinks 1.60432 0.0 7.21405   Low
cufflinks 4.16176 0.0 16.485    
cufflinks 12.5365 0.0 39.5378    
cufflinks 9.32361 0.0 32.5486    
cufflinks 7.63214 0.0 27.2683    
cufflinks 9.41822 0.0 28.1767    
cufflinks 13.2271 0.0 41.7646   High
cufflinks 8.202     High High
cufflinks 2.876        
cufflinks 1.276       Low
cufflinks 4.261        
cufflinks 6.576       High
cufflinks 3.929        
cufflinks 2.105        
cufflinks 3.321        
cufflinks 2.717        
cufflinks 3.069        
cufflinks 1.48       Low
cufflinks 2.01        
cufflinks 1.687        
cufflinks 3.204        
cufflinks 1.307       Low
cufflinks 1.806        
cufflinks 3.676        

0 Strain