Gene : Glyma.02G134800 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00160//PF00515//PF07719 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) Genomic Order:  1348
Name:  ? Glyma.02G134800 Secondary Identifier:  ? PAC:30510671
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G134800 0.5kb upstream 0.5kb upstream 5598 true Chr02: 13958441-13964038 Glycine max
Glyma.02G134800 0.5kb upstream 0.5kb upstream 500 false Chr02: 13963539-13964038 Glycine max
Glyma.02G134800 0.5kb downstream 0.5kb downstream 5598 true Chr02: 13957941-13963538 Glycine max
Glyma.02G134800 0.5kb downstream 0.5kb downstream 500 false Chr02: 13957941-13958440 Glycine max
Glyma.02G134800 1.0kb upstream 1.0kb upstream 6098 true Chr02: 13958441-13964538 Glycine max
Glyma.02G134800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13963539-13964538 Glycine max
Glyma.02G134800 1.0kb downstream 1.0kb downstream 6098 true Chr02: 13957441-13963538 Glycine max
Glyma.02G134800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13957441-13958440 Glycine max
Glyma.02G134800 2.0kb upstream 2.0kb upstream 7098 true Chr02: 13958441-13965538 Glycine max
Glyma.02G134800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13963539-13965538 Glycine max
Glyma.02G134800 2.0kb downstream 2.0kb downstream 7098 true Chr02: 13956441-13963538 Glycine max
Glyma.02G134800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13956441-13958440 Glycine max
Glyma.02G134800 5.0kb upstream 5.0kb upstream 10098 true Chr02: 13958441-13968538 Glycine max
Glyma.02G134800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13963539-13968538 Glycine max
Glyma.02G134800 5.0kb downstream 5.0kb downstream 10098 true Chr02: 13953441-13963538 Glycine max
Glyma.02G134800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13953441-13958440 Glycine max
Glyma.02G134800 10.0kb upstream 10.0kb upstream 15098 true Chr02: 13958441-13973538 Glycine max
Glyma.02G134800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13963539-13973538 Glycine max
Glyma.02G134800 10.0kb downstream 10.0kb downstream 15098 true Chr02: 13948441-13963538 Glycine max
Glyma.02G134800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13948441-13958440 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307937 5265 Fabidae View MSA
124069399 5270 Rosid View MSA
123742275 5271 Pentapetalae View MSA
122795031 5272 Eudicot View MSA
122048372 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121348447 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.99131 0.0 35.2019    
cufflinks 5.8398 0.0 31.2265    
cufflinks 1.81438 0.0 12.8962   Low
cufflinks 5.75835 0.0 29.674    
cufflinks 11.4215 0.0 53.098    
cufflinks 4.84539 0.0 22.2138    
cufflinks 4.46256 0.0 30.0628    
cufflinks 10.5574 0.0 48.2728    
cufflinks 14.5721 0.0 64.3597   High
cufflinks 0.455        
cufflinks 0.14       Low
cufflinks 0.223        
cufflinks 0.668       High
cufflinks 0.82       High
cufflinks 0.496        
cufflinks 0.32        
cufflinks 0.315        
cufflinks 0.352        
cufflinks 0.232        
cufflinks 0.418        
cufflinks 0.135       Low
cufflinks 0.421        
cufflinks 0.413        
cufflinks 0.127       Low
cufflinks 0.426        
cufflinks 0.328        

0 Strain