Gene : Glyma.02G145300 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase Genomic Order:  1453
Name:  ? Glyma.02G145300 Secondary Identifier:  ? PAC:30510298
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LEU-DEG2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G145300 0.5kb upstream 0.5kb upstream 5356 true Chr02: 15008822-15014177 Glycine max
Glyma.02G145300 0.5kb upstream 0.5kb upstream 500 false Chr02: 15008822-15009321 Glycine max
Glyma.02G145300 0.5kb downstream 0.5kb downstream 5356 true Chr02: 15009322-15014677 Glycine max
Glyma.02G145300 0.5kb downstream 0.5kb downstream 500 false Chr02: 15014178-15014677 Glycine max
Glyma.02G145300 1.0kb upstream 1.0kb upstream 5856 true Chr02: 15008322-15014177 Glycine max
Glyma.02G145300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15008322-15009321 Glycine max
Glyma.02G145300 1.0kb downstream 1.0kb downstream 5856 true Chr02: 15009322-15015177 Glycine max
Glyma.02G145300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15014178-15015177 Glycine max
Glyma.02G145300 2.0kb upstream 2.0kb upstream 6856 true Chr02: 15007322-15014177 Glycine max
Glyma.02G145300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15007322-15009321 Glycine max
Glyma.02G145300 2.0kb downstream 2.0kb downstream 6856 true Chr02: 15009322-15016177 Glycine max
Glyma.02G145300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15014178-15016177 Glycine max
Glyma.02G145300 5.0kb upstream 5.0kb upstream 9856 true Chr02: 15004322-15014177 Glycine max
Glyma.02G145300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15004322-15009321 Glycine max
Glyma.02G145300 5.0kb downstream 5.0kb downstream 9856 true Chr02: 15009322-15019177 Glycine max
Glyma.02G145300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15014178-15019177 Glycine max
Glyma.02G145300 10.0kb upstream 10.0kb upstream 14856 true Chr02: 14999322-15014177 Glycine max
Glyma.02G145300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14999322-15009321 Glycine max
Glyma.02G145300 10.0kb downstream 10.0kb downstream 14856 true Chr02: 15009322-15024177 Glycine max
Glyma.02G145300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15014178-15024177 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303666 5265 Fabidae View MSA
124062314 5270 Rosid View MSA
123743627 5271 Pentapetalae View MSA
122788393 5272 Eudicot View MSA
122046633 5273 Angiosperm View MSA
121344540 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5056 0.0 60.8319 High  
cufflinks 5.5389 0.0 15.3993    
cufflinks 60.3164 0.0 181.613 High High
cufflinks 5.61738 0.0 15.5928    
cufflinks 12.1755 0.0 32.501    
cufflinks 13.0747 0.0 34.8841    
cufflinks 5.88018 0.0 16.2629    
cufflinks 3.49178 0.0 10.2179   Low
cufflinks 12.435 0.0 33.1888    
cufflinks 2.658       Low
cufflinks 104.338     High High
cufflinks 15.314     High  
cufflinks 5.85        
cufflinks 6.035        
cufflinks 80.612     High High
cufflinks 27.199     High  
cufflinks 1.884       Low
cufflinks 6.202        
cufflinks 4.403        
cufflinks 42.114     High  
cufflinks 55.719     High High
cufflinks 16.471     High  
cufflinks 4.917        
cufflinks 49.368     High  
cufflinks 40.579     High  
cufflinks 20.115     High  

0 Strain