Gene : Glyma.02G157800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15141:SF40 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED Genomic Order:  1578
Name:  ? Glyma.02G157800 Secondary Identifier:  ? PAC:30508605
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G157800 0.5kb upstream 0.5kb upstream 5478 true Chr02: 17128244-17133721 Glycine max
Glyma.02G157800 0.5kb upstream 0.5kb upstream 500 false Chr02: 17133222-17133721 Glycine max
Glyma.02G157800 0.5kb downstream 0.5kb downstream 5478 true Chr02: 17127744-17133221 Glycine max
Glyma.02G157800 0.5kb downstream 0.5kb downstream 500 false Chr02: 17127744-17128243 Glycine max
Glyma.02G157800 1.0kb upstream 1.0kb upstream 5978 true Chr02: 17128244-17134221 Glycine max
Glyma.02G157800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 17133222-17134221 Glycine max
Glyma.02G157800 1.0kb downstream 1.0kb downstream 5978 true Chr02: 17127244-17133221 Glycine max
Glyma.02G157800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 17127244-17128243 Glycine max
Glyma.02G157800 2.0kb upstream 2.0kb upstream 6978 true Chr02: 17128244-17135221 Glycine max
Glyma.02G157800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 17133222-17135221 Glycine max
Glyma.02G157800 2.0kb downstream 2.0kb downstream 6978 true Chr02: 17126244-17133221 Glycine max
Glyma.02G157800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 17126244-17128243 Glycine max
Glyma.02G157800 5.0kb upstream 5.0kb upstream 9978 true Chr02: 17128244-17138221 Glycine max
Glyma.02G157800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 17133222-17138221 Glycine max
Glyma.02G157800 5.0kb downstream 5.0kb downstream 9978 true Chr02: 17123244-17133221 Glycine max
Glyma.02G157800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 17123244-17128243 Glycine max
Glyma.02G157800 10.0kb upstream 10.0kb upstream 14978 true Chr02: 17128244-17143221 Glycine max
Glyma.02G157800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 17133222-17143221 Glycine max
Glyma.02G157800 10.0kb downstream 10.0kb downstream 14978 true Chr02: 17118244-17133221 Glycine max
Glyma.02G157800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 17118244-17128243 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299503 5265 Fabidae View MSA
124062245 5270 Rosid View MSA
123747167 5271 Pentapetalae View MSA
122796041 5272 Eudicot View MSA
122045393 5273 Angiosperm View MSA
121348214 5274 Embryophyte View MSA
123380774 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.71084 0.0 33.1462    
cufflinks 4.19942 0.0 18.1563    
cufflinks 4.24554 0.0 18.0461    
cufflinks 4.71614 0.0 19.8896    
cufflinks 5.51432 0.0 22.2436    
cufflinks 7.84331 0.0 30.2816   High
cufflinks 2.85496 0.0 12.2867   Low
cufflinks 6.0782 0.0 24.5313    
cufflinks 8.67075 0.0 32.9989   High
cufflinks 1.11        
cufflinks 9.386     High High
cufflinks 0.913        
cufflinks 1.133        
cufflinks 0.971        
cufflinks 9.932     High High
cufflinks 0.762        
cufflinks 2.88        
cufflinks 1.239        
cufflinks 0.989        
cufflinks 0.588       Low
cufflinks 14.883     High High
cufflinks 0.779        
cufflinks 0.757        
cufflinks 7.231     High High
cufflinks 0.772        
cufflinks 11.97     High High

0 Strain