Gene : Glyma.02G153500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32370:SF30 - BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 Genomic Order:  1535
Name:  ? Glyma.02G153500 Secondary Identifier:  ? PAC:30506431
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G153500 0.5kb upstream 0.5kb upstream 5715 true Chr02: 15759635-15765349 Glycine max
Glyma.02G153500 0.5kb upstream 0.5kb upstream 500 false Chr02: 15764850-15765349 Glycine max
Glyma.02G153500 0.5kb downstream 0.5kb downstream 5715 true Chr02: 15759135-15764849 Glycine max
Glyma.02G153500 0.5kb downstream 0.5kb downstream 500 false Chr02: 15759135-15759634 Glycine max
Glyma.02G153500 1.0kb upstream 1.0kb upstream 6215 true Chr02: 15759635-15765849 Glycine max
Glyma.02G153500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15764850-15765849 Glycine max
Glyma.02G153500 1.0kb downstream 1.0kb downstream 6215 true Chr02: 15758635-15764849 Glycine max
Glyma.02G153500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15758635-15759634 Glycine max
Glyma.02G153500 2.0kb upstream 2.0kb upstream 7215 true Chr02: 15759635-15766849 Glycine max
Glyma.02G153500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15764850-15766849 Glycine max
Glyma.02G153500 2.0kb downstream 2.0kb downstream 7215 true Chr02: 15757635-15764849 Glycine max
Glyma.02G153500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15757635-15759634 Glycine max
Glyma.02G153500 5.0kb upstream 5.0kb upstream 10215 true Chr02: 15759635-15769849 Glycine max
Glyma.02G153500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15764850-15769849 Glycine max
Glyma.02G153500 5.0kb downstream 5.0kb downstream 10215 true Chr02: 15754635-15764849 Glycine max
Glyma.02G153500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15754635-15759634 Glycine max
Glyma.02G153500 10.0kb upstream 10.0kb upstream 15215 true Chr02: 15759635-15774849 Glycine max
Glyma.02G153500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15764850-15774849 Glycine max
Glyma.02G153500 10.0kb downstream 10.0kb downstream 15215 true Chr02: 15749635-15764849 Glycine max
Glyma.02G153500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15749635-15759634 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308207 5265 Fabidae View MSA
124062194 5270 Rosid View MSA
123742261 5271 Pentapetalae View MSA
122789969 5272 Eudicot View MSA
122042362 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.63559 0.0 7.54479    
cufflinks 0.864543 0.0 5.8346    
cufflinks 1.05899 0.0 5.39681    
cufflinks 1.54559 0.0 7.58069    
cufflinks 1.56247 0.0 7.68947    
cufflinks 0.960342 0.0 5.85638    
cufflinks 0.498886 0.0 2.25107   Low
cufflinks 1.08353 0.0 6.12008    
cufflinks 1.71489 0.0 8.4496   High
cufflinks 0.183        
cufflinks 0.067       Low
cufflinks 0.305        
cufflinks 0.839       High
cufflinks 0.344        
cufflinks 0.022     Low Low
cufflinks 0.291        
cufflinks 0.103        
cufflinks 0.39       High
cufflinks 0.117        
cufflinks 0.138        
cufflinks 0.1        
cufflinks 0.191        
cufflinks 0.236        
cufflinks 0.062       Low
cufflinks 0.205        
cufflinks 0.171        

0 Strain