Gene : Glyma.02G149200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  1492
Name:  ? Glyma.02G149200 Secondary Identifier:  ? PAC:30507169
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G149200 0.5kb upstream 0.5kb upstream 12739 true Chr02: 15345662-15358400 Glycine max
Glyma.02G149200 0.5kb upstream 0.5kb upstream 500 false Chr02: 15357901-15358400 Glycine max
Glyma.02G149200 0.5kb downstream 0.5kb downstream 12739 true Chr02: 15345162-15357900 Glycine max
Glyma.02G149200 0.5kb downstream 0.5kb downstream 500 false Chr02: 15345162-15345661 Glycine max
Glyma.02G149200 1.0kb upstream 1.0kb upstream 13239 true Chr02: 15345662-15358900 Glycine max
Glyma.02G149200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15357901-15358900 Glycine max
Glyma.02G149200 1.0kb downstream 1.0kb downstream 13239 true Chr02: 15344662-15357900 Glycine max
Glyma.02G149200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15344662-15345661 Glycine max
Glyma.02G149200 2.0kb upstream 2.0kb upstream 14239 true Chr02: 15345662-15359900 Glycine max
Glyma.02G149200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15357901-15359900 Glycine max
Glyma.02G149200 2.0kb downstream 2.0kb downstream 14239 true Chr02: 15343662-15357900 Glycine max
Glyma.02G149200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15343662-15345661 Glycine max
Glyma.02G149200 5.0kb upstream 5.0kb upstream 17239 true Chr02: 15345662-15362900 Glycine max
Glyma.02G149200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15357901-15362900 Glycine max
Glyma.02G149200 5.0kb downstream 5.0kb downstream 17239 true Chr02: 15340662-15357900 Glycine max
Glyma.02G149200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15340662-15345661 Glycine max
Glyma.02G149200 10.0kb upstream 10.0kb upstream 22239 true Chr02: 15345662-15367900 Glycine max
Glyma.02G149200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15357901-15367900 Glycine max
Glyma.02G149200 10.0kb downstream 10.0kb downstream 22239 true Chr02: 15335662-15357900 Glycine max
Glyma.02G149200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15335662-15345661 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307172 5265 Fabidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.35353 0.0 29.5124    
cufflinks 4.91931 0.0 17.2059    
cufflinks 11.7197 0.0 42.9773   High
cufflinks 8.34839 0.0 29.2712    
cufflinks 5.2595 0.0 18.1326    
cufflinks 3.9988 0.0 15.822   Low
cufflinks 10.7215 0.0 38.0394   High
cufflinks 6.53132 0.0 22.4861    
cufflinks 5.93573 0.0 20.3306    
cufflinks 0.878       Low
cufflinks 1.584        
cufflinks 1.772       High
cufflinks 0.876       Low
cufflinks 0.928       Low
cufflinks 1.945       High
cufflinks 1.217        
cufflinks 1.061        
cufflinks 1.295        
cufflinks 1.418        
cufflinks 1.13        
cufflinks 1.669       High
cufflinks 1.301        
cufflinks 1.324        
cufflinks 1.716       High
cufflinks 1.111        
cufflinks 1.403        

0 Strain