Gene : Glyma.02G168900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23270:SF10 - PROTEIN RRP5 HOMOLOG Genomic Order:  1689
Name:  ? Glyma.02G168900 Secondary Identifier:  ? PAC:30507408
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G168900 0.5kb upstream 0.5kb upstream 40902 true Chr02: 26029033-26069934 Glycine max
Glyma.02G168900 0.5kb upstream 0.5kb upstream 500 false Chr02: 26069435-26069934 Glycine max
Glyma.02G168900 0.5kb downstream 0.5kb downstream 40902 true Chr02: 26028533-26069434 Glycine max
Glyma.02G168900 0.5kb downstream 0.5kb downstream 500 false Chr02: 26028533-26029032 Glycine max
Glyma.02G168900 1.0kb upstream 1.0kb upstream 41402 true Chr02: 26029033-26070434 Glycine max
Glyma.02G168900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26069435-26070434 Glycine max
Glyma.02G168900 1.0kb downstream 1.0kb downstream 41402 true Chr02: 26028033-26069434 Glycine max
Glyma.02G168900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26028033-26029032 Glycine max
Glyma.02G168900 2.0kb upstream 2.0kb upstream 42402 true Chr02: 26029033-26071434 Glycine max
Glyma.02G168900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26069435-26071434 Glycine max
Glyma.02G168900 2.0kb downstream 2.0kb downstream 42402 true Chr02: 26027033-26069434 Glycine max
Glyma.02G168900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26027033-26029032 Glycine max
Glyma.02G168900 5.0kb upstream 5.0kb upstream 45402 true Chr02: 26029033-26074434 Glycine max
Glyma.02G168900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26069435-26074434 Glycine max
Glyma.02G168900 5.0kb downstream 5.0kb downstream 45402 true Chr02: 26024033-26069434 Glycine max
Glyma.02G168900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26024033-26029032 Glycine max
Glyma.02G168900 10.0kb upstream 10.0kb upstream 50402 true Chr02: 26029033-26079434 Glycine max
Glyma.02G168900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26069435-26079434 Glycine max
Glyma.02G168900 10.0kb downstream 10.0kb downstream 50402 true Chr02: 26019033-26069434 Glycine max
Glyma.02G168900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26019033-26029032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303333 5265 Fabidae View MSA
124068160 5270 Rosid View MSA
123740236 5271 Pentapetalae View MSA
122787572 5272 Eudicot View MSA
122045709 5273 Angiosperm View MSA
121346258 5274 Embryophyte View MSA
123424813 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.84037 0.0 18.4179   High
cufflinks 3.23683 0.0 12.4713    
cufflinks 1.80855 0.0 6.75918    
cufflinks 2.55734 0.0 11.6806    
cufflinks 3.89417 0.0 16.1733    
cufflinks 1.15672 0.0 4.20156   Low
cufflinks 4.38454 0.0 15.0527    
cufflinks 1.74385 0.0 5.67417    
cufflinks 3.19094 0.0 11.0258    
cufflinks 0.092     Low  
cufflinks 0.022     Low Low
cufflinks 0.174        
cufflinks 0.262       High
cufflinks 0.338       High
cufflinks 0.06        
cufflinks 0.119        
cufflinks 0.071        
cufflinks 0.167        
cufflinks 0.253       High
cufflinks 0.087     Low  
cufflinks 0.035     Low Low
cufflinks 0.12        
cufflinks 0.15        
cufflinks 0.031     Low Low
cufflinks 0.117        
cufflinks 0.067        

0 Strain