Gene : Glyma.02G216600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Genomic Order:  2166
Name:  ? Glyma.02G216600 Secondary Identifier:  ? PAC:30510492
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G216600 0.5kb upstream 0.5kb upstream 21632 true Chr02: 40344950-40366581 Glycine max
Glyma.02G216600 0.5kb upstream 0.5kb upstream 500 false Chr02: 40344950-40345449 Glycine max
Glyma.02G216600 0.5kb downstream 0.5kb downstream 21632 true Chr02: 40345450-40367081 Glycine max
Glyma.02G216600 0.5kb downstream 0.5kb downstream 500 false Chr02: 40366582-40367081 Glycine max
Glyma.02G216600 1.0kb upstream 1.0kb upstream 22132 true Chr02: 40344450-40366581 Glycine max
Glyma.02G216600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40344450-40345449 Glycine max
Glyma.02G216600 1.0kb downstream 1.0kb downstream 22132 true Chr02: 40345450-40367581 Glycine max
Glyma.02G216600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40366582-40367581 Glycine max
Glyma.02G216600 2.0kb upstream 2.0kb upstream 23132 true Chr02: 40343450-40366581 Glycine max
Glyma.02G216600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40343450-40345449 Glycine max
Glyma.02G216600 2.0kb downstream 2.0kb downstream 23132 true Chr02: 40345450-40368581 Glycine max
Glyma.02G216600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40366582-40368581 Glycine max
Glyma.02G216600 5.0kb upstream 5.0kb upstream 26132 true Chr02: 40340450-40366581 Glycine max
Glyma.02G216600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40340450-40345449 Glycine max
Glyma.02G216600 5.0kb downstream 5.0kb downstream 26132 true Chr02: 40345450-40371581 Glycine max
Glyma.02G216600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40366582-40371581 Glycine max
Glyma.02G216600 10.0kb upstream 10.0kb upstream 31132 true Chr02: 40335450-40366581 Glycine max
Glyma.02G216600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40335450-40345449 Glycine max
Glyma.02G216600 10.0kb downstream 10.0kb downstream 31132 true Chr02: 40345450-40376581 Glycine max
Glyma.02G216600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40366582-40376581 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312070 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.055612 0.0 0.243613 Low  
cufflinks 0.0269744 0.0 0.131123 Low Low
cufflinks 0.301823 0.0 1.18161    
cufflinks 0.24697 0.0 1.85549    
cufflinks 4.21487 0.0 19.6001   High
cufflinks 5.68533 0.0 25.427   High
cufflinks 0.0244216 0.0 0.129081 Low Low
cufflinks 0.907254 0.0 4.46972    
cufflinks 6.15867 0.0 25.5706   High
cufflinks 0.003     Low Low
cufflinks 0.398        
cufflinks 0.005     Low Low
cufflinks 0.217        
cufflinks 0.194        
cufflinks 0.199        
cufflinks 0.001     Low Low
cufflinks 0.154        
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.515        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.495        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.547        

0 Strain