Gene : Glyma.02G201300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23083:SF397 - UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Genomic Order:  2013
Name:  ? Glyma.02G201300 Secondary Identifier:  ? PAC:30506942
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7437 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G201300 0.5kb upstream 0.5kb upstream 17939 true Chr02: 38506022-38523960 Glycine max
Glyma.02G201300 0.5kb upstream 0.5kb upstream 500 false Chr02: 38523461-38523960 Glycine max
Glyma.02G201300 0.5kb downstream 0.5kb downstream 17939 true Chr02: 38505522-38523460 Glycine max
Glyma.02G201300 0.5kb downstream 0.5kb downstream 500 false Chr02: 38505522-38506021 Glycine max
Glyma.02G201300 1.0kb upstream 1.0kb upstream 18439 true Chr02: 38506022-38524460 Glycine max
Glyma.02G201300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38523461-38524460 Glycine max
Glyma.02G201300 1.0kb downstream 1.0kb downstream 18439 true Chr02: 38505022-38523460 Glycine max
Glyma.02G201300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38505022-38506021 Glycine max
Glyma.02G201300 2.0kb upstream 2.0kb upstream 19439 true Chr02: 38506022-38525460 Glycine max
Glyma.02G201300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38523461-38525460 Glycine max
Glyma.02G201300 2.0kb downstream 2.0kb downstream 19439 true Chr02: 38504022-38523460 Glycine max
Glyma.02G201300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38504022-38506021 Glycine max
Glyma.02G201300 5.0kb upstream 5.0kb upstream 22439 true Chr02: 38506022-38528460 Glycine max
Glyma.02G201300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38523461-38528460 Glycine max
Glyma.02G201300 5.0kb downstream 5.0kb downstream 22439 true Chr02: 38501022-38523460 Glycine max
Glyma.02G201300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38501022-38506021 Glycine max
Glyma.02G201300 10.0kb upstream 10.0kb upstream 27439 true Chr02: 38506022-38533460 Glycine max
Glyma.02G201300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38523461-38533460 Glycine max
Glyma.02G201300 10.0kb downstream 10.0kb downstream 27439 true Chr02: 38496022-38523460 Glycine max
Glyma.02G201300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38496022-38506021 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303349 5265 Fabidae View MSA
124065064 5270 Rosid View MSA
123739134 5271 Pentapetalae View MSA
122791595 5272 Eudicot View MSA
122044417 5273 Angiosperm View MSA
121347707 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.65462 0.0 36.9501   Low
cufflinks 17.4801 0.0 71.1531    
cufflinks 16.4083 0.0 65.9851    
cufflinks 17.1696 0.0 76.2927    
cufflinks 12.6134 0.0 53.3543    
cufflinks 8.08585 0.0 31.2683   Low
cufflinks 17.7103 0.0 72.2392    
cufflinks 13.6427 0.0 53.7918    
cufflinks 12.7948 0.0 49.698    
cufflinks 0.662        
cufflinks 0.265       Low
cufflinks 1.006       High
cufflinks 0.665        
cufflinks 0.568        
cufflinks 0.38        
cufflinks 0.683        
cufflinks 0.437        
cufflinks 0.843        
cufflinks 1.242       High
cufflinks 0.777        
cufflinks 0.246       Low
cufflinks 0.803        
cufflinks 0.828        
cufflinks 0.3       Low
cufflinks 0.672        
cufflinks 0.384        

0 Strain