Gene : Glyma.02G234500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11766 - TYROSYL-TRNA SYNTHETASE Genomic Order:  2345
Name:  ? Glyma.02G234500 Secondary Identifier:  ? PAC:30510890
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G234500 0.5kb upstream 0.5kb upstream 5596 true Chr02: 42184100-42189695 Glycine max
Glyma.02G234500 0.5kb upstream 0.5kb upstream 500 false Chr02: 42184100-42184599 Glycine max
Glyma.02G234500 0.5kb downstream 0.5kb downstream 5596 true Chr02: 42184600-42190195 Glycine max
Glyma.02G234500 0.5kb downstream 0.5kb downstream 500 false Chr02: 42189696-42190195 Glycine max
Glyma.02G234500 1.0kb upstream 1.0kb upstream 6096 true Chr02: 42183600-42189695 Glycine max
Glyma.02G234500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42183600-42184599 Glycine max
Glyma.02G234500 1.0kb downstream 1.0kb downstream 6096 true Chr02: 42184600-42190695 Glycine max
Glyma.02G234500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42189696-42190695 Glycine max
Glyma.02G234500 2.0kb upstream 2.0kb upstream 7096 true Chr02: 42182600-42189695 Glycine max
Glyma.02G234500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42182600-42184599 Glycine max
Glyma.02G234500 2.0kb downstream 2.0kb downstream 7096 true Chr02: 42184600-42191695 Glycine max
Glyma.02G234500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42189696-42191695 Glycine max
Glyma.02G234500 5.0kb upstream 5.0kb upstream 10096 true Chr02: 42179600-42189695 Glycine max
Glyma.02G234500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42179600-42184599 Glycine max
Glyma.02G234500 5.0kb downstream 5.0kb downstream 10096 true Chr02: 42184600-42194695 Glycine max
Glyma.02G234500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42189696-42194695 Glycine max
Glyma.02G234500 10.0kb upstream 10.0kb upstream 15096 true Chr02: 42174600-42189695 Glycine max
Glyma.02G234500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42174600-42184599 Glycine max
Glyma.02G234500 10.0kb downstream 10.0kb downstream 15096 true Chr02: 42184600-42199695 Glycine max
Glyma.02G234500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42189696-42199695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311730 5265 Fabidae View MSA
124066531 5270 Rosid View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.41251 0.0 9.92755   High
cufflinks 2.44852 0.0 7.45502    
cufflinks 1.70126 0.0 5.44461   Low
cufflinks 2.01278 0.0 6.30106    
cufflinks 2.49746 0.0 7.57839    
cufflinks 2.20319 0.0 6.79509    
cufflinks 1.9743 0.0 6.19579    
cufflinks 2.03791 0.0 6.36829    
cufflinks 2.58826 0.0 7.80941    
cufflinks 0.965        
cufflinks 0.284       Low
cufflinks 1.994        
cufflinks 1.415        
cufflinks 1.546        
cufflinks 0.679        
cufflinks 2.216        
cufflinks 0.309       Low
cufflinks 2.325        
cufflinks 1.316        
cufflinks 2.857       High
cufflinks 0.425       Low
cufflinks 2.732       High
cufflinks 2.45        
cufflinks 0.611        
cufflinks 2.365        
cufflinks 0.4       Low

0 Strain