Gene : Glyma.02G041500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  415
Name:  ? Glyma.02G041500 Secondary Identifier:  ? PAC:30508622
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G041500 0.5kb upstream 0.5kb upstream 6936 true Chr02: 3901550-3908485 Glycine max
Glyma.02G041500 0.5kb upstream 0.5kb upstream 500 false Chr02: 3901550-3902049 Glycine max
Glyma.02G041500 0.5kb downstream 0.5kb downstream 6936 true Chr02: 3902050-3908985 Glycine max
Glyma.02G041500 0.5kb downstream 0.5kb downstream 500 false Chr02: 3908486-3908985 Glycine max
Glyma.02G041500 1.0kb upstream 1.0kb upstream 7436 true Chr02: 3901050-3908485 Glycine max
Glyma.02G041500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3901050-3902049 Glycine max
Glyma.02G041500 1.0kb downstream 1.0kb downstream 7436 true Chr02: 3902050-3909485 Glycine max
Glyma.02G041500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3908486-3909485 Glycine max
Glyma.02G041500 2.0kb upstream 2.0kb upstream 8436 true Chr02: 3900050-3908485 Glycine max
Glyma.02G041500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3900050-3902049 Glycine max
Glyma.02G041500 2.0kb downstream 2.0kb downstream 8436 true Chr02: 3902050-3910485 Glycine max
Glyma.02G041500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3908486-3910485 Glycine max
Glyma.02G041500 5.0kb upstream 5.0kb upstream 11436 true Chr02: 3897050-3908485 Glycine max
Glyma.02G041500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3897050-3902049 Glycine max
Glyma.02G041500 5.0kb downstream 5.0kb downstream 11436 true Chr02: 3902050-3913485 Glycine max
Glyma.02G041500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3908486-3913485 Glycine max
Glyma.02G041500 10.0kb upstream 10.0kb upstream 16436 true Chr02: 3892050-3908485 Glycine max
Glyma.02G041500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3892050-3902049 Glycine max
Glyma.02G041500 10.0kb downstream 10.0kb downstream 16436 true Chr02: 3902050-3918485 Glycine max
Glyma.02G041500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3908486-3918485 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306643 5265 Fabidae View MSA
124071999 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.92517 0.0 31.1849    
cufflinks 25.5776 0.0 97.9422 High  
cufflinks 0.0464969 0.0 0.194539 Low Low
cufflinks 0.416685 0.0 2.11486    
cufflinks 7.70085 0.0 34.2403    
cufflinks 5.81837 0.0 24.6632    
cufflinks 0.589783 0.0 2.844    
cufflinks 40.6845 0.0 163.124 High High
cufflinks 13.508 0.0 53.8272    
cufflinks 1.997       High
cufflinks 0.411        
cufflinks 0.012     Low Low
cufflinks 0.486        
cufflinks 0.01     Low Low
cufflinks 0.291        
cufflinks 0.228        
cufflinks 1.927       High
cufflinks 0.021     Low Low
cufflinks 1.656       High
cufflinks 0.043     Low  
cufflinks 0.424        
cufflinks 0.078     Low  
cufflinks 0.068     Low  
cufflinks 0.807        
cufflinks 0.142        
cufflinks 0.589        

0 Strain