Gene : Glyma.02G044000 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG0107//KOG0114 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) Genomic Order:  440
Name:  ? Glyma.02G044000 Secondary Identifier:  ? PAC:30506705
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G044000 0.5kb upstream 0.5kb upstream 3684 true Chr02: 4082180-4085863 Glycine max
Glyma.02G044000 0.5kb upstream 0.5kb upstream 500 false Chr02: 4082180-4082679 Glycine max
Glyma.02G044000 0.5kb downstream 0.5kb downstream 3684 true Chr02: 4082680-4086363 Glycine max
Glyma.02G044000 0.5kb downstream 0.5kb downstream 500 false Chr02: 4085864-4086363 Glycine max
Glyma.02G044000 1.0kb upstream 1.0kb upstream 4184 true Chr02: 4081680-4085863 Glycine max
Glyma.02G044000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4081680-4082679 Glycine max
Glyma.02G044000 1.0kb downstream 1.0kb downstream 4184 true Chr02: 4082680-4086863 Glycine max
Glyma.02G044000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4085864-4086863 Glycine max
Glyma.02G044000 2.0kb upstream 2.0kb upstream 5184 true Chr02: 4080680-4085863 Glycine max
Glyma.02G044000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4080680-4082679 Glycine max
Glyma.02G044000 2.0kb downstream 2.0kb downstream 5184 true Chr02: 4082680-4087863 Glycine max
Glyma.02G044000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4085864-4087863 Glycine max
Glyma.02G044000 5.0kb upstream 5.0kb upstream 8184 true Chr02: 4077680-4085863 Glycine max
Glyma.02G044000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4077680-4082679 Glycine max
Glyma.02G044000 5.0kb downstream 5.0kb downstream 8184 true Chr02: 4082680-4090863 Glycine max
Glyma.02G044000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4085864-4090863 Glycine max
Glyma.02G044000 10.0kb upstream 10.0kb upstream 13184 true Chr02: 4072680-4085863 Glycine max
Glyma.02G044000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4072680-4082679 Glycine max
Glyma.02G044000 10.0kb downstream 10.0kb downstream 13184 true Chr02: 4082680-4095863 Glycine max
Glyma.02G044000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4085864-4095863 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309837 5265 Fabidae View MSA
124070278 5270 Rosid View MSA
123749009 5271 Pentapetalae View MSA
122794925 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.5643 0.0 175.467 High  
cufflinks 52.7012 0.0 212.638 High  
cufflinks 51.4106 0.0 209.08 High  
cufflinks 53.64 0.0 219.339 High  
cufflinks 55.0647 0.0 225.384 High  
cufflinks 35.7942 0.0 147.536 High Low
cufflinks 59.9174 0.0 252.26 High High
cufflinks 42.6034 0.0 164.219 High  
cufflinks 43.3851 0.0 184.289 High  
cufflinks 3.881        
cufflinks 2.365       Low
cufflinks 6.162       High
cufflinks 4.887        
cufflinks 6.201       High
cufflinks 2.3       Low
cufflinks 4.178        
cufflinks 3.084        
cufflinks 6.548       High
cufflinks 6.433       High
cufflinks 3.831        
cufflinks 2.986        
cufflinks 4.026        
cufflinks 4.483        
cufflinks 3.124        
cufflinks 3.704        
cufflinks 2.883        

0 Strain