Gene : Glyma.18G285000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21240 - 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE Genomic Order:  2850
Name:  ? Glyma.18G285000 Secondary Identifier:  ? PAC:30554926
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G285000 0.5kb upstream 0.5kb upstream 4309 true Chr18: 56559432-56563740 Glycine max
Glyma.18G285000 0.5kb upstream 0.5kb upstream 500 false Chr18: 56559432-56559931 Glycine max
Glyma.18G285000 0.5kb downstream 0.5kb downstream 4309 true Chr18: 56559932-56564240 Glycine max
Glyma.18G285000 0.5kb downstream 0.5kb downstream 500 false Chr18: 56563741-56564240 Glycine max
Glyma.18G285000 1.0kb upstream 1.0kb upstream 4809 true Chr18: 56558932-56563740 Glycine max
Glyma.18G285000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56558932-56559931 Glycine max
Glyma.18G285000 1.0kb downstream 1.0kb downstream 4809 true Chr18: 56559932-56564740 Glycine max
Glyma.18G285000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56563741-56564740 Glycine max
Glyma.18G285000 2.0kb upstream 2.0kb upstream 5809 true Chr18: 56557932-56563740 Glycine max
Glyma.18G285000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56557932-56559931 Glycine max
Glyma.18G285000 2.0kb downstream 2.0kb downstream 5809 true Chr18: 56559932-56565740 Glycine max
Glyma.18G285000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56563741-56565740 Glycine max
Glyma.18G285000 5.0kb upstream 5.0kb upstream 8809 true Chr18: 56554932-56563740 Glycine max
Glyma.18G285000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56554932-56559931 Glycine max
Glyma.18G285000 5.0kb downstream 5.0kb downstream 8809 true Chr18: 56559932-56568740 Glycine max
Glyma.18G285000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56563741-56568740 Glycine max
Glyma.18G285000 10.0kb upstream 10.0kb upstream 13809 true Chr18: 56549932-56563740 Glycine max
Glyma.18G285000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56549932-56559931 Glycine max
Glyma.18G285000 10.0kb downstream 10.0kb downstream 13809 true Chr18: 56559932-56573740 Glycine max
Glyma.18G285000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56563741-56573740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041304 5273 Angiosperm View MSA
122308132 5265 Fabidae View MSA
124062191 5270 Rosid View MSA
123739774 5271 Pentapetalae View MSA
122787272 5272 Eudicot View MSA
121344175 5274 Embryophyte View MSA
123425366 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88303 0.0 15.2697   Low
cufflinks 19.8245 0.0 67.489    
cufflinks 8.9823 0.0 34.1316    
cufflinks 18.0369 0.0 85.5891    
cufflinks 10.8995 0.0 56.8509    
cufflinks 20.2638 0.0 68.94    
cufflinks 12.9447 0.0 66.9935    
cufflinks 12.0745 0.0 62.36    
cufflinks 6.91002 0.0 42.0905    
cufflinks 2.932       High
cufflinks 0.091       Low
cufflinks 1.091        
cufflinks 1.551        
cufflinks 1.513        
cufflinks 0.169       Low
cufflinks 1.23        
cufflinks 0.287        
cufflinks 2.355       High
cufflinks 2.544       High
cufflinks 0.969        
cufflinks 0.213        
cufflinks 0.989        
cufflinks 1.33        
cufflinks 0.067       Low
cufflinks 1.027        
cufflinks 0.319        

0 Strain