Gene : Glyma.02G077900 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  779
Name:  ? Glyma.02G077900 Secondary Identifier:  ? PAC:30510777
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G077900 0.5kb upstream 0.5kb upstream 2913 true Chr02: 6732603-6735515 Glycine max
Glyma.02G077900 0.5kb upstream 0.5kb upstream 500 false Chr02: 6732603-6733102 Glycine max
Glyma.02G077900 0.5kb downstream 0.5kb downstream 2913 true Chr02: 6733103-6736015 Glycine max
Glyma.02G077900 0.5kb downstream 0.5kb downstream 500 false Chr02: 6735516-6736015 Glycine max
Glyma.02G077900 1.0kb upstream 1.0kb upstream 3413 true Chr02: 6732103-6735515 Glycine max
Glyma.02G077900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6732103-6733102 Glycine max
Glyma.02G077900 1.0kb downstream 1.0kb downstream 3413 true Chr02: 6733103-6736515 Glycine max
Glyma.02G077900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6735516-6736515 Glycine max
Glyma.02G077900 2.0kb upstream 2.0kb upstream 4413 true Chr02: 6731103-6735515 Glycine max
Glyma.02G077900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6731103-6733102 Glycine max
Glyma.02G077900 2.0kb downstream 2.0kb downstream 4413 true Chr02: 6733103-6737515 Glycine max
Glyma.02G077900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6735516-6737515 Glycine max
Glyma.02G077900 5.0kb upstream 5.0kb upstream 7413 true Chr02: 6728103-6735515 Glycine max
Glyma.02G077900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6728103-6733102 Glycine max
Glyma.02G077900 5.0kb downstream 5.0kb downstream 7413 true Chr02: 6733103-6740515 Glycine max
Glyma.02G077900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6735516-6740515 Glycine max
Glyma.02G077900 10.0kb upstream 10.0kb upstream 12413 true Chr02: 6723103-6735515 Glycine max
Glyma.02G077900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6723103-6733102 Glycine max
Glyma.02G077900 10.0kb downstream 10.0kb downstream 12413 true Chr02: 6733103-6745515 Glycine max
Glyma.02G077900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6735516-6745515 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302770 5265 Fabidae View MSA
124070101 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.276925 0.0 1.0356    
cufflinks 0.345245 0.0 1.27732    
cufflinks 0.0939944 0.0 0.367609 Low Low
cufflinks 0.176219 0.0 0.671981 Low  
cufflinks 0.4671 0.0 1.70013    
cufflinks 0.208512 0.0 0.789667 Low  
cufflinks 0.88945 0.0 3.08276   High
cufflinks 0.264633 0.0 0.99148    
cufflinks 0.47499 0.0 1.72594    
cufflinks 0.346        
cufflinks 0.079       Low
cufflinks 0.327        
cufflinks 0.815       High
cufflinks 1.112       High
cufflinks 0.138        
cufflinks 0.19        
cufflinks 0.135        
cufflinks 0.208        
cufflinks 0.393        
cufflinks 0.169        
cufflinks 0.119        
cufflinks 0.195        
cufflinks 0.359        
cufflinks 0.078       Low
cufflinks 0.248        
cufflinks 0.113        

0 Strain