Gene : Glyma.02G099500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31140:SF3 - AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED Genomic Order:  995
Name:  ? Glyma.02G099500 Secondary Identifier:  ? PAC:30509579
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G099500 0.5kb upstream 0.5kb upstream 2723 true Chr02: 9306726-9309448 Glycine max
Glyma.02G099500 0.5kb upstream 0.5kb upstream 500 false Chr02: 9308949-9309448 Glycine max
Glyma.02G099500 0.5kb downstream 0.5kb downstream 2723 true Chr02: 9306226-9308948 Glycine max
Glyma.02G099500 0.5kb downstream 0.5kb downstream 500 false Chr02: 9306226-9306725 Glycine max
Glyma.02G099500 1.0kb upstream 1.0kb upstream 3223 true Chr02: 9306726-9309948 Glycine max
Glyma.02G099500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9308949-9309948 Glycine max
Glyma.02G099500 1.0kb downstream 1.0kb downstream 3223 true Chr02: 9305726-9308948 Glycine max
Glyma.02G099500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9305726-9306725 Glycine max
Glyma.02G099500 2.0kb upstream 2.0kb upstream 4223 true Chr02: 9306726-9310948 Glycine max
Glyma.02G099500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9308949-9310948 Glycine max
Glyma.02G099500 2.0kb downstream 2.0kb downstream 4223 true Chr02: 9304726-9308948 Glycine max
Glyma.02G099500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9304726-9306725 Glycine max
Glyma.02G099500 5.0kb upstream 5.0kb upstream 7223 true Chr02: 9306726-9313948 Glycine max
Glyma.02G099500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9308949-9313948 Glycine max
Glyma.02G099500 5.0kb downstream 5.0kb downstream 7223 true Chr02: 9301726-9308948 Glycine max
Glyma.02G099500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9301726-9306725 Glycine max
Glyma.02G099500 10.0kb upstream 10.0kb upstream 12223 true Chr02: 9306726-9318948 Glycine max
Glyma.02G099500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9308949-9318948 Glycine max
Glyma.02G099500 10.0kb downstream 10.0kb downstream 12223 true Chr02: 9296726-9308948 Glycine max
Glyma.02G099500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9296726-9306725 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303798 5265 Fabidae View MSA
124062734 5270 Rosid View MSA
123743747 5271 Pentapetalae View MSA
122794960 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 99.7597 0.0 324.22 High High
cufflinks 3.18129 0.0 9.56224    
cufflinks 5.09121 0.0 14.5009    
cufflinks 1.06119 0.0 3.67763    
cufflinks 10.2921 0.0 27.594    
cufflinks 13.8936 0.0 37.0704    
cufflinks 0.23596 0.0 0.894566   Low
cufflinks 6.644 0.0 18.3464    
cufflinks 9.9314 0.0 26.7088    
cufflinks 14.565     High  
cufflinks 72.742     High  
cufflinks 6.493       Low
cufflinks 8.281     High  
cufflinks 4.659       Low
cufflinks 48.085     High  
cufflinks 58.302     High  
cufflinks 90.174     High High
cufflinks 3.424       Low
cufflinks 6.891       Low
cufflinks 49.174     High  
cufflinks 135.928     High High
cufflinks 37.763     High  
cufflinks 14.771     High  
cufflinks 97.316     High High
cufflinks 36.471     High  
cufflinks 94.8     High High

0 Strain