Gene : Glyma.18G286400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11620//PTHR11620:SF14 - 60S RIBOSOMAL PROTEIN L23A Genomic Order:  2864
Name:  ? Glyma.18G286400 Secondary Identifier:  ? PAC:30555694
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G286400 0.5kb upstream 0.5kb upstream 2664 true Chr18: 56664660-56667323 Glycine max
Glyma.18G286400 0.5kb upstream 0.5kb upstream 500 false Chr18: 56664660-56665159 Glycine max
Glyma.18G286400 0.5kb downstream 0.5kb downstream 2664 true Chr18: 56665160-56667823 Glycine max
Glyma.18G286400 0.5kb downstream 0.5kb downstream 500 false Chr18: 56667324-56667823 Glycine max
Glyma.18G286400 1.0kb upstream 1.0kb upstream 3164 true Chr18: 56664160-56667323 Glycine max
Glyma.18G286400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56664160-56665159 Glycine max
Glyma.18G286400 1.0kb downstream 1.0kb downstream 3164 true Chr18: 56665160-56668323 Glycine max
Glyma.18G286400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56667324-56668323 Glycine max
Glyma.18G286400 2.0kb upstream 2.0kb upstream 4164 true Chr18: 56663160-56667323 Glycine max
Glyma.18G286400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56663160-56665159 Glycine max
Glyma.18G286400 2.0kb downstream 2.0kb downstream 4164 true Chr18: 56665160-56669323 Glycine max
Glyma.18G286400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56667324-56669323 Glycine max
Glyma.18G286400 5.0kb upstream 5.0kb upstream 7164 true Chr18: 56660160-56667323 Glycine max
Glyma.18G286400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56660160-56665159 Glycine max
Glyma.18G286400 5.0kb downstream 5.0kb downstream 7164 true Chr18: 56665160-56672323 Glycine max
Glyma.18G286400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56667324-56672323 Glycine max
Glyma.18G286400 10.0kb upstream 10.0kb upstream 12164 true Chr18: 56655160-56667323 Glycine max
Glyma.18G286400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56655160-56665159 Glycine max
Glyma.18G286400 10.0kb downstream 10.0kb downstream 12164 true Chr18: 56665160-56677323 Glycine max
Glyma.18G286400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56667324-56677323 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315036 5265 Fabidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.5623 0.0 84.7776 High  
cufflinks 38.3284 0.0 116.876 High  
cufflinks 9.88816 0.0 36.3211   Low
cufflinks 19.2585 0.0 62.5606    
cufflinks 94.4774 0.0 315.049 High High
cufflinks 85.5454 0.0 267.575 High High
cufflinks 41.0926 0.0 128.773 High  
cufflinks 40.5424 0.0 123.173 High  
cufflinks 51.6788 0.0 162.044 High  
cufflinks 7.015        
cufflinks 1.992       Low
cufflinks 4.864        
cufflinks 33.375     High High
cufflinks 51.748     High High
cufflinks 1.977       Low
cufflinks 4.304        
cufflinks 3.802        
cufflinks 5.75        
cufflinks 7.096        
cufflinks 2.832        
cufflinks 3.416        
cufflinks 3.23        
cufflinks 7.766     High  
cufflinks 1.961       Low
cufflinks 4.51        
cufflinks 4.681        

0 Strain