Gene : Glyma.02G109800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31719:SF40 - NAC TRANSCRIPTION FACTOR 29 Genomic Order:  1098
Name:  ? Glyma.02G109800 Secondary Identifier:  ? PAC:30508647
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G109800 0.5kb upstream 0.5kb upstream 2518 true Chr02: 10525394-10527911 Glycine max
Glyma.02G109800 0.5kb upstream 0.5kb upstream 500 false Chr02: 10527412-10527911 Glycine max
Glyma.02G109800 0.5kb downstream 0.5kb downstream 2518 true Chr02: 10524894-10527411 Glycine max
Glyma.02G109800 0.5kb downstream 0.5kb downstream 500 false Chr02: 10524894-10525393 Glycine max
Glyma.02G109800 1.0kb upstream 1.0kb upstream 3018 true Chr02: 10525394-10528411 Glycine max
Glyma.02G109800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10527412-10528411 Glycine max
Glyma.02G109800 1.0kb downstream 1.0kb downstream 3018 true Chr02: 10524394-10527411 Glycine max
Glyma.02G109800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10524394-10525393 Glycine max
Glyma.02G109800 2.0kb upstream 2.0kb upstream 4018 true Chr02: 10525394-10529411 Glycine max
Glyma.02G109800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10527412-10529411 Glycine max
Glyma.02G109800 2.0kb downstream 2.0kb downstream 4018 true Chr02: 10523394-10527411 Glycine max
Glyma.02G109800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10523394-10525393 Glycine max
Glyma.02G109800 5.0kb upstream 5.0kb upstream 7018 true Chr02: 10525394-10532411 Glycine max
Glyma.02G109800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10527412-10532411 Glycine max
Glyma.02G109800 5.0kb downstream 5.0kb downstream 7018 true Chr02: 10520394-10527411 Glycine max
Glyma.02G109800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10520394-10525393 Glycine max
Glyma.02G109800 10.0kb upstream 10.0kb upstream 12018 true Chr02: 10525394-10537411 Glycine max
Glyma.02G109800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10527412-10537411 Glycine max
Glyma.02G109800 10.0kb downstream 10.0kb downstream 12018 true Chr02: 10515394-10527411 Glycine max
Glyma.02G109800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10515394-10525393 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306888 5265 Fabidae View MSA
124065483 5270 Rosid View MSA
123736663 5271 Pentapetalae View MSA
122792841 5272 Eudicot View MSA
122049237 5273 Angiosperm View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.36686 0.0 18.5523    
cufflinks 1.58826 0.0 5.5256    
cufflinks 126.043 0.0 394.409 High High
cufflinks 0.619577 0.0 2.29418   Low
cufflinks 6.21173 0.0 18.1829    
cufflinks 67.8247 0.0 192.089 High High
cufflinks 0.448212 0.0 1.68889   Low
cufflinks 2.41128 0.0 8.00874    
cufflinks 11.5398 0.0 31.5999    
cufflinks 0.749       Low
cufflinks 57.856     High High
cufflinks 58.838     High High
cufflinks 8.746     High  
cufflinks 4.886        
cufflinks 56.352     High High
cufflinks 1.444        
cufflinks 2.979        
cufflinks 1.616        
cufflinks 1.692        
cufflinks 1.745        
cufflinks 54.095     High High
cufflinks 1.742        
cufflinks 1.618        
cufflinks 77.065     High High
cufflinks 1.752        
cufflinks 34.83     High  

0 Strain