Gene : Glyma.01G218300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21686:SF12 - DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 2 Genomic Order:  2183
Name:  ? Glyma.01G218300 Secondary Identifier:  ? PAC:30542083
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G218300 0.5kb upstream 0.5kb upstream 4127 true Chr01: 54837994-54842120 Glycine max
Glyma.01G218300 0.5kb upstream 0.5kb upstream 500 false Chr01: 54837994-54838493 Glycine max
Glyma.01G218300 0.5kb downstream 0.5kb downstream 4127 true Chr01: 54838494-54842620 Glycine max
Glyma.01G218300 0.5kb downstream 0.5kb downstream 500 false Chr01: 54842121-54842620 Glycine max
Glyma.01G218300 1.0kb upstream 1.0kb upstream 4627 true Chr01: 54837494-54842120 Glycine max
Glyma.01G218300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54837494-54838493 Glycine max
Glyma.01G218300 1.0kb downstream 1.0kb downstream 4627 true Chr01: 54838494-54843120 Glycine max
Glyma.01G218300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54842121-54843120 Glycine max
Glyma.01G218300 2.0kb upstream 2.0kb upstream 5627 true Chr01: 54836494-54842120 Glycine max
Glyma.01G218300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54836494-54838493 Glycine max
Glyma.01G218300 2.0kb downstream 2.0kb downstream 5627 true Chr01: 54838494-54844120 Glycine max
Glyma.01G218300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54842121-54844120 Glycine max
Glyma.01G218300 5.0kb upstream 5.0kb upstream 8627 true Chr01: 54833494-54842120 Glycine max
Glyma.01G218300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54833494-54838493 Glycine max
Glyma.01G218300 5.0kb downstream 5.0kb downstream 8627 true Chr01: 54838494-54847120 Glycine max
Glyma.01G218300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54842121-54847120 Glycine max
Glyma.01G218300 10.0kb upstream 10.0kb upstream 13627 true Chr01: 54828494-54842120 Glycine max
Glyma.01G218300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54828494-54838493 Glycine max
Glyma.01G218300 10.0kb downstream 10.0kb downstream 13627 true Chr01: 54838494-54852120 Glycine max
Glyma.01G218300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54842121-54852120 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028901 5273 Angiosperm View MSA
122299714 5265 Fabidae View MSA
124072878 5270 Rosid View MSA
123738912 5271 Pentapetalae View MSA
122787489 5272 Eudicot View MSA
121349839 5274 Embryophyte View MSA
123427981 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3698 0.0 80.7955    
cufflinks 17.6155 0.0 53.6847    
cufflinks 12.0715 0.0 46.1034   Low
cufflinks 17.216 0.0 77.5646    
cufflinks 18.6338 0.0 74.7672    
cufflinks 12.8301 0.0 40.7243   Low
cufflinks 31.0819 0.0 138.812 High High
cufflinks 14.2497 0.0 51.5735    
cufflinks 17.6228 0.0 72.895    
cufflinks 0.744       Low
cufflinks 1.526       High
cufflinks 0.997        
cufflinks 0.997        
cufflinks 1.203        
cufflinks 1.357       High
cufflinks 1.039        
cufflinks 1.055        
cufflinks 0.939        
cufflinks 1.123        
cufflinks 0.973        
cufflinks 1.639       High
cufflinks 0.937        
cufflinks 1.046        
cufflinks 0.975        
cufflinks 0.866       Low
cufflinks 1.158        

0 Strain