Gene : Glyma.01G218400 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR12203//PTHR12203:SF32 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED Genomic Order:  2184
Name:  ? Glyma.01G218400 Secondary Identifier:  ? PAC:30544634
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G218400 0.5kb upstream 0.5kb upstream 4744 true Chr01: 54842101-54846844 Glycine max
Glyma.01G218400 0.5kb upstream 0.5kb upstream 500 false Chr01: 54842101-54842600 Glycine max
Glyma.01G218400 0.5kb downstream 0.5kb downstream 4744 true Chr01: 54842601-54847344 Glycine max
Glyma.01G218400 0.5kb downstream 0.5kb downstream 500 false Chr01: 54846845-54847344 Glycine max
Glyma.01G218400 1.0kb upstream 1.0kb upstream 5244 true Chr01: 54841601-54846844 Glycine max
Glyma.01G218400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54841601-54842600 Glycine max
Glyma.01G218400 1.0kb downstream 1.0kb downstream 5244 true Chr01: 54842601-54847844 Glycine max
Glyma.01G218400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54846845-54847844 Glycine max
Glyma.01G218400 2.0kb upstream 2.0kb upstream 6244 true Chr01: 54840601-54846844 Glycine max
Glyma.01G218400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54840601-54842600 Glycine max
Glyma.01G218400 2.0kb downstream 2.0kb downstream 6244 true Chr01: 54842601-54848844 Glycine max
Glyma.01G218400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54846845-54848844 Glycine max
Glyma.01G218400 5.0kb upstream 5.0kb upstream 9244 true Chr01: 54837601-54846844 Glycine max
Glyma.01G218400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54837601-54842600 Glycine max
Glyma.01G218400 5.0kb downstream 5.0kb downstream 9244 true Chr01: 54842601-54851844 Glycine max
Glyma.01G218400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54846845-54851844 Glycine max
Glyma.01G218400 10.0kb upstream 10.0kb upstream 14244 true Chr01: 54832601-54846844 Glycine max
Glyma.01G218400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54832601-54842600 Glycine max
Glyma.01G218400 10.0kb downstream 10.0kb downstream 14244 true Chr01: 54842601-54856844 Glycine max
Glyma.01G218400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54846845-54856844 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313119 5265 Fabidae View MSA
124071694 5270 Rosid View MSA
123749767 5271 Pentapetalae View MSA
122786856 5272 Eudicot View MSA
122044328 5273 Angiosperm View MSA
121310279 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.05105 0.0 8.73978    
cufflinks 0.467705 0.0 2.14237   Low
cufflinks 0.994492 0.0 3.97232    
cufflinks 9.9323 0.0 33.9219   High
cufflinks 1.71593 0.0 7.86221    
cufflinks 8.04061 0.0 28.2026    
cufflinks 1.63357 0.0 7.73926    
cufflinks 11.2016 0.0 33.6303   High
cufflinks 4.15926 0.0 14.2453    
cufflinks 2.295        
cufflinks 11.58     High High
cufflinks 0.469        
cufflinks 1.229        
cufflinks 0.176       Low
cufflinks 17.571     High High
cufflinks 0.419        
cufflinks 3.463        
cufflinks 0.426        
cufflinks 0.257       Low
cufflinks 0.346        
cufflinks 13.818     High High
cufflinks 0.412        
cufflinks 0.682        
cufflinks 3.455        
cufflinks 0.3        
cufflinks 13.389     High High

0 Strain