Gene : Glyma.01G221500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850//PTHR11850:SF66 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  2215
Name:  ? Glyma.01G221500 Secondary Identifier:  ? PAC:30544021
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G221500 0.5kb upstream 0.5kb upstream 5454 true Chr01: 55055560-55061013 Glycine max
Glyma.01G221500 0.5kb upstream 0.5kb upstream 500 false Chr01: 55055560-55056059 Glycine max
Glyma.01G221500 0.5kb downstream 0.5kb downstream 5454 true Chr01: 55056060-55061513 Glycine max
Glyma.01G221500 0.5kb downstream 0.5kb downstream 500 false Chr01: 55061014-55061513 Glycine max
Glyma.01G221500 1.0kb upstream 1.0kb upstream 5954 true Chr01: 55055060-55061013 Glycine max
Glyma.01G221500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55055060-55056059 Glycine max
Glyma.01G221500 1.0kb downstream 1.0kb downstream 5954 true Chr01: 55056060-55062013 Glycine max
Glyma.01G221500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55061014-55062013 Glycine max
Glyma.01G221500 2.0kb upstream 2.0kb upstream 6954 true Chr01: 55054060-55061013 Glycine max
Glyma.01G221500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55054060-55056059 Glycine max
Glyma.01G221500 2.0kb downstream 2.0kb downstream 6954 true Chr01: 55056060-55063013 Glycine max
Glyma.01G221500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55061014-55063013 Glycine max
Glyma.01G221500 5.0kb upstream 5.0kb upstream 9954 true Chr01: 55051060-55061013 Glycine max
Glyma.01G221500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55051060-55056059 Glycine max
Glyma.01G221500 5.0kb downstream 5.0kb downstream 9954 true Chr01: 55056060-55066013 Glycine max
Glyma.01G221500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55061014-55066013 Glycine max
Glyma.01G221500 10.0kb upstream 10.0kb upstream 14954 true Chr01: 55046060-55061013 Glycine max
Glyma.01G221500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55046060-55056059 Glycine max
Glyma.01G221500 10.0kb downstream 10.0kb downstream 14954 true Chr01: 55056060-55071013 Glycine max
Glyma.01G221500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55061014-55071013 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308400 5265 Fabidae View MSA
124068051 5270 Rosid View MSA
123740482 5271 Pentapetalae View MSA
122791610 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.3819 0.0 148.241 High High
cufflinks 0.0960497 0.0 0.374259 Low Low
cufflinks 6.22024 0.0 24.4646    
cufflinks 7.51603 0.0 29.4087    
cufflinks 3.6177 0.0 15.8569    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.80973 0.0 14.5323    
cufflinks 1.2218 0.0 6.97489    
cufflinks 12.1481 0.0 46.5227    
cufflinks 0.031     Low Low
cufflinks 0.452        
cufflinks 0.989        
cufflinks 0.036     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.443       High
cufflinks 1.608        
cufflinks 0.444        
cufflinks 1.261        
cufflinks 0.038     Low Low
cufflinks 3.769       High
cufflinks 0.145        
cufflinks 3.194       High
cufflinks 1.093        
cufflinks 0.576        
cufflinks 2.686        
cufflinks 0.546        

0 Strain