Gene : Glyma.01G220200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR15141:SF38 - BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2202
Name:  ? Glyma.01G220200 Secondary Identifier:  ? PAC:30542308
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G220200 0.5kb upstream 0.5kb upstream 5102 true Chr01: 54949879-54954980 Glycine max
Glyma.01G220200 0.5kb upstream 0.5kb upstream 500 false Chr01: 54949879-54950378 Glycine max
Glyma.01G220200 0.5kb downstream 0.5kb downstream 5102 true Chr01: 54950379-54955480 Glycine max
Glyma.01G220200 0.5kb downstream 0.5kb downstream 500 false Chr01: 54954981-54955480 Glycine max
Glyma.01G220200 1.0kb upstream 1.0kb upstream 5602 true Chr01: 54949379-54954980 Glycine max
Glyma.01G220200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54949379-54950378 Glycine max
Glyma.01G220200 1.0kb downstream 1.0kb downstream 5602 true Chr01: 54950379-54955980 Glycine max
Glyma.01G220200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54954981-54955980 Glycine max
Glyma.01G220200 2.0kb upstream 2.0kb upstream 6602 true Chr01: 54948379-54954980 Glycine max
Glyma.01G220200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54948379-54950378 Glycine max
Glyma.01G220200 2.0kb downstream 2.0kb downstream 6602 true Chr01: 54950379-54956980 Glycine max
Glyma.01G220200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54954981-54956980 Glycine max
Glyma.01G220200 5.0kb upstream 5.0kb upstream 9602 true Chr01: 54945379-54954980 Glycine max
Glyma.01G220200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54945379-54950378 Glycine max
Glyma.01G220200 5.0kb downstream 5.0kb downstream 9602 true Chr01: 54950379-54959980 Glycine max
Glyma.01G220200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54954981-54959980 Glycine max
Glyma.01G220200 10.0kb upstream 10.0kb upstream 14602 true Chr01: 54940379-54954980 Glycine max
Glyma.01G220200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54940379-54950378 Glycine max
Glyma.01G220200 10.0kb downstream 10.0kb downstream 14602 true Chr01: 54950379-54964980 Glycine max
Glyma.01G220200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54954981-54964980 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254719 5265 Fabidae View MSA
123996755 5270 Rosid View MSA
123571171 5271 Pentapetalae View MSA
122605900 5272 Eudicot View MSA
122044451 5273 Angiosperm View MSA
121346556 5274 Embryophyte View MSA
123380406 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.02068 0.0 28.2286    
cufflinks 8.50339 0.0 29.7749    
cufflinks 10.9936 0.0 37.5509   High
cufflinks 10.7068 0.0 36.6594    
cufflinks 5.07021 0.0 19.3941   Low
cufflinks 6.67042 0.0 24.1435    
cufflinks 11.4075 0.0 38.9962   High
cufflinks 7.35733 0.0 26.2488    
cufflinks 7.99213 0.0 28.172    
cufflinks 1.299       Low
cufflinks 2.025        
cufflinks 2.874       High
cufflinks 1.418        
cufflinks 1.314       Low
cufflinks 1.921        
cufflinks 2.172        
cufflinks 0.902       Low
cufflinks 2.126        
cufflinks 2.205        
cufflinks 2.042        
cufflinks 1.826        
cufflinks 2.169        
cufflinks 1.63        
cufflinks 2.272        
cufflinks 2.064        
cufflinks 2.031        

0 Strain