Gene : Glyma.18G281400 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2814
Name:  ? Glyma.18G281400 Secondary Identifier:  ? PAC:30558746
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G281400 0.5kb upstream 0.5kb upstream 4660 true Chr18: 56218084-56222743 Glycine max
Glyma.18G281400 0.5kb upstream 0.5kb upstream 500 false Chr18: 56222244-56222743 Glycine max
Glyma.18G281400 0.5kb downstream 0.5kb downstream 4660 true Chr18: 56217584-56222243 Glycine max
Glyma.18G281400 0.5kb downstream 0.5kb downstream 500 false Chr18: 56217584-56218083 Glycine max
Glyma.18G281400 1.0kb upstream 1.0kb upstream 5160 true Chr18: 56218084-56223243 Glycine max
Glyma.18G281400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56222244-56223243 Glycine max
Glyma.18G281400 1.0kb downstream 1.0kb downstream 5160 true Chr18: 56217084-56222243 Glycine max
Glyma.18G281400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56217084-56218083 Glycine max
Glyma.18G281400 2.0kb upstream 2.0kb upstream 6160 true Chr18: 56218084-56224243 Glycine max
Glyma.18G281400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56222244-56224243 Glycine max
Glyma.18G281400 2.0kb downstream 2.0kb downstream 6160 true Chr18: 56216084-56222243 Glycine max
Glyma.18G281400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56216084-56218083 Glycine max
Glyma.18G281400 5.0kb upstream 5.0kb upstream 9160 true Chr18: 56218084-56227243 Glycine max
Glyma.18G281400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56222244-56227243 Glycine max
Glyma.18G281400 5.0kb downstream 5.0kb downstream 9160 true Chr18: 56213084-56222243 Glycine max
Glyma.18G281400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56213084-56218083 Glycine max
Glyma.18G281400 10.0kb upstream 10.0kb upstream 14160 true Chr18: 56218084-56232243 Glycine max
Glyma.18G281400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56222244-56232243 Glycine max
Glyma.18G281400 10.0kb downstream 10.0kb downstream 14160 true Chr18: 56208084-56222243 Glycine max
Glyma.18G281400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56208084-56218083 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308061 5265 Fabidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.8303 0.0 82.3514 High High
cufflinks 1.97873 0.0 6.8121    
cufflinks 3.47556 0.0 11.1319    
cufflinks 0.104393 0.0 0.41796 Low Low
cufflinks 2.35187 0.0 7.94494    
cufflinks 3.07633 0.0 10.0608    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.68269 0.0 5.85854    
cufflinks 3.14495 0.0 10.226    
cufflinks 0.066     Low Low
cufflinks 3.983       High
cufflinks 0.846        
cufflinks 1.499        
cufflinks 0.794        
cufflinks 0.549        
cufflinks 0.097     Low Low
cufflinks 0.398        
cufflinks 0.119        
cufflinks 1.173        
cufflinks 0.131        
cufflinks 4.831       High
cufflinks 0.171        
cufflinks 0.127        
cufflinks 5.56       High
cufflinks 0.093     Low Low
cufflinks 1.547        

0 Strain